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Difference between revisions of "TSS:Hg 106018.1"

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Line 2: Line 2:
 
|GDH1=
 
|GDH1=
 
|GLUD=
 
|GLUD=
|all_trans=ENST00000437629.6:-308
+
|all_trans=HGNC:28773
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 24: Line 24:
 
|nearest_refseq=NM_005271
 
|nearest_refseq=NM_005271
 
|nearest_unigene=Hs.500409
 
|nearest_unigene=Hs.500409
|num_trans=1
+
|num_trans=54537
 
|species=human
 
|species=human
 
|start=87094468
 
|start=87094468

Latest revision as of 19:43, 19 July 2021

Basic information about the TSS


TSS ID:hg_106018.1
Species:human
Chr:chr10
TSS Classification:yes
Start:87094468
End:87094509
Strand:+
TSS Score:1
Start of the center position in the TSS region:87094488
End of the center position in the TSS region:87094489



Gene and protein annotation


Transcript_name:ENST00000437629.6
Distance:-308
GeneID:54537
HGNC/MGI_ID:HGNC:28773
UniProt_ID:U3KQ89
Gene_name:shieldin complex subunit 2
Gene_symbol:SHLD2
Gene_synonyms:FAM35A1 MGC5560 RINN2 bA163M19.1
Gene_source:HGNC:28773



Transcript annotation


Transcript_name:ENST00000437629.6
Distance:-308
Num_trans:54537
All_trans:HGNC:28773



TATA-Box annotation


Distance to TSS:354
Nearest PromoterID:NM_001318906
Entrez ID:2746
Nearest Unigene:Hs.500409
Nearest Refseq:NM_005271
Nearest Ensembl:ENSG00000148672
Gene Name:shieldin complex subunit 2
Gene Alias:GDH|GDH1|GLUD
Gene Description:glutamate dehydrogenase 1
Gene Type:protein-coding
CpG%:0.09
GC%:0.641791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):