Difference between revisions of "TSS:Hg 106205.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| − | |distance= | + | |distance=83 |
|distance_to_tss=-123 | |distance_to_tss=-123 | ||
|end=91162910 | |end=91162910 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=91162889 | |start_of_center_position=91162889 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001257101.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106205.1 | |tss_id=hg_106205.1 | ||
Latest revision as of 19:48, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 91162889 |
|---|---|
| End of the center position in the TSS region: | 91162890 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001257101.2 |
|---|---|
| Distance: | 83 |
| Num_trans: | 5 |
| All_trans: | ENST00000614189.4:102 NR_046435:102 NM_001257101:102 BC007377:108 BC051845:127 |
TATA-Box annotation
| Distance to TSS: | -123 |
|---|---|
| Nearest PromoterID: | NM_001257101 |
| Entrez ID: | 84333 |
| Nearest Unigene: | Hs.500512 |
| Nearest Refseq: | NM_032373 |
| Nearest Ensembl: | ENSG00000180628 |
| Gene Name: | polycomb group ring finger 5 |
| Gene Alias: | RNF159 |
| Gene Description: | polycomb group ring finger 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
