Difference between revisions of "TSS:Hg 109535.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|MRT37= | |MRT37= | ||
| − | |all_trans= | + | |all_trans=HGNC:494 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001149 | |nearest_refseq=NM_001149 | ||
|nearest_unigene=Hs.499725 | |nearest_unigene=Hs.499725 | ||
| − | |num_trans= | + | |num_trans=288 |
|species=human | |species=human | ||
|start=60390221 | |start=60390221 | ||
| Line 29: | Line 29: | ||
|strand=- | |strand=- | ||
|tata_box=-67(GTTTTTAAAAGA,-,0.00),-66(TTTTTAAAAGAC,+,0.00) | |tata_box=-67(GTTTTTAAAAGA,-,0.00),-66(TTTTTAAAAGAC,+,0.00) | ||
| − | |transcript_name=ENST00000280772.7 | + | |transcript_name=ENST00000280772.7 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_109535.1 | |tss_id=hg_109535.1 | ||
Latest revision as of 20:59, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 60390221 |
|---|---|
| End of the center position in the TSS region: | 60390222 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000280772.7 |
|---|---|
| Distance: | 347 |
| Num_trans: | 288 |
| All_trans: | HGNC:494 |
TATA-Box annotation
| Distance to TSS: | -347 |
|---|---|
| Nearest PromoterID: | NM_020987 |
| Entrez ID: | 288 |
| Nearest Unigene: | Hs.499725 |
| Nearest Refseq: | NM_001149 |
| Nearest Ensembl: | ENSG00000151150 |
| Gene Name: | ankyrin 3 |
| Gene Alias: | ANKYRIN-G|MRT37 |
| Gene Description: | ankyrin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -67(GTTTTTAAAAGA,-,0.00),-66(TTTTTAAAAGAC,+,0.00) |
