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Difference between revisions of "TSS:Hg 121940.1"

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{{TSSDetail
 
{{TSSDetail
 
|PR=
 
|PR=
|all_trans=ENST00000534013.5:-26 AK304853:-26 ENST00000325455.10:-112 ENST00000617858.4:-112 ENST00000619228.2:-112 NM_000926:-112 NM_001271162:-112 LF385523:-112 MA621100:-112 LF375569:-240 MA611146:-240 LF213148:-349 MA448725:-349 LF208370:-439 MA443947:-439 AF016381:448 M15716:448 LF212258:-451 MA447835:-451
+
|all_trans=HGNC:8910
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.055
 
|cpg_percent=0.055
Line 23: Line 23:
 
|nearest_refseq=NM_000926
 
|nearest_refseq=NM_000926
 
|nearest_unigene=Hs.32405
 
|nearest_unigene=Hs.32405
|num_trans=19
+
|num_trans=5241
 
|species=human
 
|species=human
 
|start=101129691
 
|start=101129691

Latest revision as of 01:31, 20 July 2021

Basic information about the TSS


TSS ID:hg_121940.1
Species:human
Chr:chr11
TSS Classification:yes
Start:101129691
End:101129701
Strand:-
TSS Score:1
Start of the center position in the TSS region:101129696
End of the center position in the TSS region:101129697



Gene and protein annotation


Transcript_name:ENST00000534013.5 AK304853
Distance:-26
GeneID:5241
HGNC/MGI_ID:HGNC:8910
UniProt_ID:P06401
Gene_name:progesterone receptor
Gene_symbol:PGR
Gene_synonyms:NR3C3 PR
Gene_source:HGNC:8910



Transcript annotation


Transcript_name:ENST00000534013.5 AK304853
Distance:-26
Num_trans:5241
All_trans:HGNC:8910



TATA-Box annotation


Distance to TSS:117
Nearest PromoterID:NM_000926
Entrez ID:5241
Nearest Unigene:Hs.32405
Nearest Refseq:NM_000926
Nearest Ensembl:ENSG00000082175
Gene Name:progesterone receptor
Gene Alias:NR3C3|PR
Gene Description:progesterone receptor
Gene Type:protein-coding
CpG%:0.055
GC%:0.537313
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):