Difference between revisions of "TSS:Hg 126899.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:40769 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_149000 | |nearest_refseq=NR_149000 | ||
|nearest_unigene=Hs.524596 | |nearest_unigene=Hs.524596 | ||
| − | |num_trans= | + | |num_trans=100130268 |
|species=human | |species=human | ||
|start=75234737 | |start=75234737 | ||
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|tata_box=2(GCTTTTAAATCA,+,0.00) | |tata_box=2(GCTTTTAAATCA,+,0.00) | ||
| − | |transcript_name=ENST00000548779.1 | + | |transcript_name=ENST00000548779.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_126899.1 | |tss_id=hg_126899.1 | ||
Latest revision as of 03:19, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 75234752 |
|---|---|
| End of the center position in the TSS region: | 75234753 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000548779.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100130268 |
| All_trans: | HGNC:40769 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NR_149000 |
| Entrez ID: | 100130268 |
| Nearest Unigene: | Hs.524596 |
| Nearest Refseq: | NR_149000 |
| Nearest Ensembl: | ENSG00000254451 |
| Gene Name: | CAPS2 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100130268 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.323383 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 2(GCTTTTAAATCA,+,0.00) |
