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Difference between revisions of "TSS:Hg 135525.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AL834203:5 AK289600:46 BC045177:63 ENST00000462234.5:65 ENST00000441784.5:-69 NM_001242870:-69 NM_144595:-69 NM_001366666:-69 AK289714:79 ENST00000465831.1:-88 AK295423:93 ENST00000314070.9:-128 ENST00000351546.7:-128 NM_001242871:-128 NM_001242869:-128 ENST00000496045.5:247
+
|all_trans=HGNC:26387
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0
 
|cpg_percent=0
Line 22: Line 22:
 
|nearest_refseq=NM_144595
 
|nearest_refseq=NM_144595
 
|nearest_unigene=Hs.349955
 
|nearest_unigene=Hs.349955
|num_trans=16
+
|num_trans=122060
 
|species=human
 
|species=human
 
|start=77741287
 
|start=77741287

Latest revision as of 06:25, 20 July 2021

Basic information about the TSS


TSS ID:hg_135525.1
Species:human
Chr:chr13
TSS Classification:yes
Start:77741287
End:77741291
Strand:+
TSS Score:1
Start of the center position in the TSS region:77741289
End of the center position in the TSS region:77741290



Gene and protein annotation


Transcript_name:AL834203
Distance:5
GeneID:122060
HGNC/MGI_ID:HGNC:26387
UniProt_ID:
Gene_name:SLAIN motif family member 1
Gene_symbol:SLAIN1
Gene_synonyms:FLJ30046
Gene_source:HGNC:26387



Transcript annotation


Transcript_name:AL834203
Distance:5
Num_trans:122060
All_trans:HGNC:26387



TATA-Box annotation


Distance to TSS:70
Nearest PromoterID:NM_001242870
Entrez ID:122060
Nearest Unigene:Hs.349955
Nearest Refseq:NM_144595
Nearest Ensembl:ENSG00000139737
Gene Name:SLAIN motif family member 1
Gene Alias:C13orf32
Gene Description:SLAIN motif family member 1
Gene Type:protein-coding
CpG%:0
GC%:0.328358
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):