Difference between revisions of "TSS:Hg 154458.1"
From referenceTSS
| Line 2: | Line 2: | ||
|SMAP-8= | |SMAP-8= | ||
|SMAP8= | |SMAP8= | ||
| − | |all_trans= | + | |all_trans=HGNC:14466 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_020465 | |nearest_refseq=NM_020465 | ||
|nearest_unigene=Hs.322430 | |nearest_unigene=Hs.322430 | ||
| − | |num_trans= | + | |num_trans=65009 |
|species=human | |species=human | ||
|start=58464273 | |start=58464273 | ||
| Line 30: | Line 30: | ||
|strand=+ | |strand=+ | ||
|tata_box=-44(TTTTTTAAACCG,+,0.00) | |tata_box=-44(TTTTTTAAACCG,+,0.00) | ||
| − | |transcript_name=ENST00000566065.5 ENST00000564867.5 ENST00000567454.5 | + | |transcript_name=ENST00000566065.5 ENST00000564867.5 ENST00000567454.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_154458.1 | |tss_id=hg_154458.1 | ||
Latest revision as of 13:17, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 58464281 |
|---|---|
| End of the center position in the TSS region: | 58464282 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000566065.5 ENST00000564867.5 ENST00000567454.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 65009 |
| All_trans: | HGNC:14466 |
TATA-Box annotation
| Distance to TSS: | 191 |
|---|---|
| Nearest PromoterID: | NM_001363869 |
| Entrez ID: | 65009 |
| Nearest Unigene: | Hs.322430 |
| Nearest Refseq: | NM_020465 |
| Nearest Ensembl: | ENSG00000103034 |
| Gene Name: | NDRG family member 4 |
| Gene Alias: | BDM1|SMAP-8|SMAP8 |
| Gene Description: | NDRG family member 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -44(TTTTTTAAACCG,+,0.00) |
