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Difference between revisions of "TSS:Hg 224208.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000449648.1:-17 ENST00000414894.1:-20 ENST00000607982.5:105 ENST00000608526.5:105 ENST00000623015.3:105 ENST00000613985.4:105 ENST00000615210.5:105 ENST00000625102.3:111 ENST00000624974.3:131 ENST00000623160.3:131 ENST00000624678.3:131 ENST00000625147.3:161
+
|all_trans=HGNC:44689
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.035
 
|cpg_percent=0.035
Line 23: Line 23:
 
|nearest_refseq=NM_006257
 
|nearest_refseq=NM_006257
 
|nearest_unigene=Hs.498570
 
|nearest_unigene=Hs.498570
|num_trans=12
+
|num_trans=439949
 
|species=human
 
|species=human
 
|start=6583695
 
|start=6583695

Latest revision as of 08:16, 21 July 2021

Basic information about the TSS


TSS ID:hg_224208.1
Species:human
Chr:chr10
TSS Classification:yes
Start:6583695
End:6583700
Strand:+
TSS Score:1
Start of the center position in the TSS region:6583697
End of the center position in the TSS region:6583698



Gene and protein annotation


Transcript_name:ENST00000449648.1
Distance:-17
GeneID:439949
HGNC/MGI_ID:HGNC:44689
UniProt_ID:
Gene_name:PRKCQ antisense RNA 1
Gene_symbol:PRKCQ-AS1
Gene_synonyms:ENST00000414894.1
Gene_source:HGNC:44689



Transcript annotation


Transcript_name:ENST00000449648.1
Distance:-17
Num_trans:439949
All_trans:HGNC:44689



TATA-Box annotation


Distance to TSS:-3052
Nearest PromoterID:NM_001323265
Entrez ID:5588
Nearest Unigene:Hs.498570
Nearest Refseq:NM_006257
Nearest Ensembl:ENSG00000065675
Gene Name:PRKCQ antisense RNA 1
Gene Alias:PRKCT|nPKC-theta
Gene Description:protein kinase C theta
Gene Type:protein-coding
CpG%:0.035
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):