Difference between revisions of "TSS:Hg 232131.1"
From referenceTSS
| Line 5: | Line 5: | ||
|distance=61 | |distance=61 | ||
|distance_to_tss=-8040 | |distance_to_tss=-8040 | ||
| − | |end= | + | |end=119080886 |
|end_of_center_position=119080885 | |end_of_center_position=119080885 | ||
|entrez_id=641451 | |entrez_id=641451 | ||
| Line 24: | Line 24: | ||
|num_trans=19 | |num_trans=19 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=119080883 |
|start_of_center_position=119080884 | |start_of_center_position=119080884 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000541549.2 JX312508 | |transcript_name=ENST00000541549.2 JX312508 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232131.1 | |tss_id=hg_232131.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=J9R021 | |uniprot_id=J9R021 | ||
}} | }} | ||
Revision as of 08:30, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119080884 |
|---|---|
| End of the center position in the TSS region: | 119080885 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000541549.2 JX312508 |
|---|---|
| Distance: | 61 |
| Num_trans: | 19 |
| All_trans: | ENST00000541549.2:61 JX312508:61 LP895213:62 ENST00000369144.8:67 NM_003750:67 AK309542:69 BC107776:74 BC064926:78 D50929:80 AK307610:84 U78311:95 BC033769:100 BC054342:103 U58046:110 BC114429:154 LF346032:206 MA581609:206 AB383762:208 AK302575:365 |
TATA-Box annotation
| Distance to TSS: | -8040 |
|---|---|
| Nearest PromoterID: | NR_002917 |
| Entrez ID: | 641451 |
| Nearest Unigene: | Hs.688653 |
| Nearest Refseq: | NR_002917 |
| Nearest Ensembl: | ENSG00000207468 |
| Gene Name: | eukaryotic translation initiation factor 3 subunit A |
| Gene Alias: | ACA19 |
| Gene Description: | small nucleolar RNA, H/ACA box 19 |
| Gene Type: | snoRNA |
| CpG%: | 0.025 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
