Difference between revisions of "TSS:Hg 232209.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance=-17 | |distance=-17 | ||
|distance_to_tss=25883 | |distance_to_tss=25883 | ||
| − | |end= | + | |end=21534766 |
|end_of_center_position=21534766 | |end_of_center_position=21534766 | ||
|entrez_id=221078 | |entrez_id=221078 | ||
| Line 26: | Line 26: | ||
|num_trans=33 | |num_trans=33 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=21534765 |
|start_of_center_position=21534765 | |start_of_center_position=21534765 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000480415.6 ENST00000462999.5 ENST00000430455.2 ENST00000479634.1 AF060927 AF060934 AF060935 AF060936 AF060937 AF060938 | |transcript_name=ENST00000480415.6 ENST00000462999.5 ENST00000430455.2 ENST00000479634.1 AF060927 AF060934 AF060935 AF060936 AF060937 AF060938 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232209.1 | |tss_id=hg_232209.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A494C093 H0Y5C4 O60696 O60697 O60699 Q71UR7 | |uniprot_id=A0A494C093 H0Y5C4 O60696 O60697 O60699 Q71UR7 | ||
}} | }} | ||
Revision as of 08:32, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21534765 |
|---|---|
| End of the center position in the TSS region: | 21534766 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000480415.6 ENST00000462999.5 ENST00000430455.2 ENST00000479634.1 AF060927 AF060934 AF060935 AF060936 AF060937 AF060938 |
|---|---|
| Distance: | -17 |
| Num_trans: | 33 |
| All_trans: | ENST00000480415.6:-17 ENST00000462999.5:-17 ENST00000430455.2:-17 ENST00000479634.1:-17 AF060927:-17 AF060934:-17 AF060935:-17 AF060936:-17 AF060937:-17 AF060938:-17 ENST00000476557.5:-64 ENST00000621220.4:-121 ENST00000377059.7:-121 CU687346:-121 KJ892460:-121 BC156206:-121 BC156949:-121 AY598745:-121 LF383675:-121 MA619252:-121 ENST00000495130.5:-276 BC129946:-287 BC094844:-289 ENST00000652497.1:-290 BC052798:-292 ENST00000471315.5:-298 ENST00000651298.1:-300 AB209755:-300 ENST00000650772.1:-326 ENST00000377091.7:-421 BC065376:-423 BC080577:-423 U13948:-428 |
TATA-Box annotation
| Distance to TSS: | 25883 |
|---|---|
| Nearest PromoterID: | NM_001351118 |
| Entrez ID: | 221078 |
| Nearest Unigene: | Hs.396175 |
| Nearest Refseq: | NM_182543 |
| Nearest Ensembl: | ENSG00000241058 |
| Gene Name: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Alias: | 4933414E04Rik|ARL5B-AS1|NOPD1 |
| Gene Description: | NOP2/Sun RNA methyltransferase 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
