Difference between revisions of "TSS:Hg 233624.1"
From referenceTSS
| Line 5: | Line 5: | ||
|distance=15 | |distance=15 | ||
|distance_to_tss=1866 | |distance_to_tss=1866 | ||
| − | |end= | + | |end=7513753 |
|end_of_center_position=7513753 | |end_of_center_position=7513753 | ||
|entrez_id=100128494 | |entrez_id=100128494 | ||
| Line 24: | Line 24: | ||
|num_trans=13 | |num_trans=13 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=7513752 |
|start_of_center_position=7513752 | |start_of_center_position=7513752 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=ENST00000528947.5 | |transcript_name=ENST00000528947.5 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_233624.1 | |tss_id=hg_233624.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=E9PK17 | |uniprot_id=E9PK17 | ||
}} | }} | ||
Revision as of 09:05, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 7513752 |
|---|---|
| End of the center position in the TSS region: | 7513753 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000528947.5 |
|---|---|
| Distance: | 15 |
| Num_trans: | 13 |
| All_trans: | ENST00000528947.5:15 BC021714:69 ENST00000299492.9:246 NR_147792:246 NM_003621:246 NM_001351862:246 NM_001351856:246 NM_001351854:246 NM_001351853:246 NM_001351855:246 AK308398:246 AK001131:246 ENST00000526873.5:-455 |
TATA-Box annotation
| Distance to TSS: | 1866 |
|---|---|
| Nearest PromoterID: | NR_104178 |
| Entrez ID: | 100128494 |
| Nearest Unigene: | Hs.713607 |
| Nearest Refseq: | NR_104178 |
| Nearest Ensembl: | ENSG00000251143 |
| Gene Name: | PPFIA binding protein 2 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100128494 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
