Difference between revisions of "TSS:Hg 234827.1"
From referenceTSS
| Line 13: | Line 13: | ||
|distance=30 | |distance=30 | ||
|distance_to_tss=38790 | |distance_to_tss=38790 | ||
| − | |end= | + | |end=35471480 |
|end_of_center_position=35471480 | |end_of_center_position=35471480 | ||
|entrez_id=55835 | |entrez_id=55835 | ||
| Line 32: | Line 32: | ||
|num_trans=1 | |num_trans=1 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=35471479 |
|start_of_center_position=35471479 | |start_of_center_position=35471479 | ||
|strand=+ | |strand=+ | ||
|tata_box=13(CTGTTTAAAAAG,-,0.00) | |tata_box=13(CTGTTTAAAAAG,-,0.00) | ||
|transcript_name=AK297773 | |transcript_name=AK297773 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_234827.1 | |tss_id=hg_234827.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=B7Z4S7 | |uniprot_id=B7Z4S7 | ||
}} | }} | ||
Revision as of 09:32, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35471479 |
|---|---|
| End of the center position in the TSS region: | 35471480 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK297773 |
|---|---|
| Distance: | 30 |
| Num_trans: | 1 |
| All_trans: | AK297773:30 |
TATA-Box annotation
| Distance to TSS: | 38790 |
|---|---|
| Nearest PromoterID: | NM_018451 |
| Entrez ID: | 55835 |
| Nearest Unigene: | Hs.513379 |
| Nearest Refseq: | NM_018451 |
| Nearest Ensembl: | ENSG00000151849 |
| Gene Name: | neurobeachin |
| Gene Alias: | BM032|CENP-J|CPAP|LAP|LIP1|MCPH6|SASS4|SCKL4|Sas-4 |
| Gene Description: | centromere protein J |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.348259 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 13(CTGTTTAAAAAG,-,0.00) |
