Difference between revisions of "TSS:Hg 234967.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MESRGP= | |MESRGP= | ||
|all_trans=NM_003576:21 ENST00000376547.7:148 AF083420:148 | |all_trans=NM_003576:21 ENST00000376547.7:148 AF083420:148 | ||
| − | |chr= | + | |chr=chr13 |
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=21 | |distance=21 | ||
|distance_to_tss=9252 | |distance_to_tss=9252 | ||
| − | |end= | + | |end=98522146 |
|end_of_center_position=98522146 | |end_of_center_position=98522146 | ||
|entrez_id=55143 | |entrez_id=55143 | ||
| Line 27: | Line 27: | ||
|num_trans=3 | |num_trans=3 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=98522145 |
|start_of_center_position=98522145 | |start_of_center_position=98522145 | ||
|strand=- | |strand=- | ||
|tata_box=89(TTTTTTAAAGCA,+,0.00) | |tata_box=89(TTTTTTAAAGCA,+,0.00) | ||
|transcript_name=NM_003576 | |transcript_name=NM_003576 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_234967.1 | |tss_id=hg_234967.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q9Y6E0 | |uniprot_id=Q9Y6E0 | ||
}} | }} | ||
Revision as of 09:35, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 98522145 |
|---|---|
| End of the center position in the TSS region: | 98522146 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_003576 |
|---|---|
| Distance: | 21 |
| Num_trans: | 3 |
| All_trans: | NM_003576:21 ENST00000376547.7:148 AF083420:148 |
TATA-Box annotation
| Distance to TSS: | 9252 |
|---|---|
| Nearest PromoterID: | NM_018101 |
| Entrez ID: | 55143 |
| Nearest Unigene: | Hs.524571 |
| Nearest Refseq: | NM_018101 |
| Nearest Ensembl: | ENSG00000134690 |
| Gene Name: | serine/threonine kinase 24 |
| Gene Alias: | BOR|BOREALIN|DasraB|MESRGP |
| Gene Description: | cell division cycle associated 8 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 89(TTTTTTAAAGCA,+,0.00) |
