Difference between revisions of "TSS:Hg 236088.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000371077.9:-81 ENST00000611228.4:-81 NR_158768:-85 NM_001366232:-85 NM_001366235:-85 NM_001366234:-85 NM_001366233:-85 NM_152489:-85 NR_158769:-85 ENST00000371076.7:99 HM005529:99 BC029895:99 CU688784:342 DQ891312:342 DQ894496:342 KJ895622:342 | |all_trans=ENST00000371077.9:-81 ENST00000611228.4:-81 NR_158768:-85 NM_001366232:-85 NM_001366235:-85 NM_001366234:-85 NM_001366233:-85 NM_152489:-85 NR_158769:-85 ENST00000371076.7:99 HM005529:99 BC029895:99 CU688784:342 DQ891312:342 DQ894496:342 KJ895622:342 | ||
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=-81 | |distance=-81 | ||
|distance_to_tss=28 | |distance_to_tss=28 | ||
| − | |end= | + | |end=64203708 |
|end_of_center_position=64203708 | |end_of_center_position=64203708 | ||
|entrez_id=79008 | |entrez_id=79008 | ||
| Line 24: | Line 24: | ||
|num_trans=16 | |num_trans=16 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=64203707 |
|start_of_center_position=64203707 | |start_of_center_position=64203707 | ||
|strand=+ | |strand=+ | ||
Revision as of 10:01, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 64203707 |
|---|---|
| End of the center position in the TSS region: | 64203708 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371077.9 ENST00000611228.4 |
|---|---|
| Distance: | -81 |
| Num_trans: | 16 |
| All_trans: | ENST00000371077.9:-81 ENST00000611228.4:-81 NR_158768:-85 NM_001366232:-85 NM_001366235:-85 NM_001366234:-85 NM_001366233:-85 NM_152489:-85 NR_158769:-85 ENST00000371076.7:99 HM005529:99 BC029895:99 CU688784:342 DQ891312:342 DQ894496:342 KJ895622:342 |
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_024044 |
| Entrez ID: | 79008 |
| Nearest Unigene: | Hs.728161 |
| Nearest Refseq: | NM_024044 |
| Nearest Ensembl: | ENSG00000181625 |
| Gene Name: | ubiquitin conjugating enzyme E2 U |
| Gene Alias: | GIYD2 |
| Gene Description: | SLX1 homolog B, structure-specific endonuclease subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
