Difference between revisions of "TSS:Hg 236287.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance=22 | |distance=22 | ||
|distance_to_tss=-85 | |distance_to_tss=-85 | ||
| − | |end= | + | |end=74915997 |
|end_of_center_position=74915997 | |end_of_center_position=74915997 | ||
|entrez_id=65009 | |entrez_id=65009 | ||
| Line 26: | Line 26: | ||
|num_trans=9 | |num_trans=9 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=74915996 |
|start_of_center_position=74915996 | |start_of_center_position=74915996 | ||
| − | |strand= | + | |strand=- |
|transcript_name=AK091316 | |transcript_name=AK091316 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_236287.1 | |tss_id=hg_236287.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 10:06, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74915996 |
|---|---|
| End of the center position in the TSS region: | 74915997 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK091316 |
|---|---|
| Distance: | 22 |
| Num_trans: | 9 |
| All_trans: | AK091316:22 ENST00000562854.1:30 ENST00000562371.5:-40 LF374730:63 MA610307:63 AF370390:-130 ENST00000562539.1:-163 LF374731:-178 MA610308:-178 |
TATA-Box annotation
| Distance to TSS: | -85 |
|---|---|
| Nearest PromoterID: | NM_001130487 |
| Entrez ID: | 65009 |
| Nearest Unigene: | Hs.322430 |
| Nearest Refseq: | NM_020465 |
| Nearest Ensembl: | ENSG00000103034 |
| Gene Name: | WD repeat domain 59 |
| Gene Alias: | BDM1|SMAP-8|SMAP8 |
| Gene Description: | NDRG family member 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
