Difference between revisions of "TSS:Hg 236393.1"
From referenceTSS
| Line 2: | Line 2: | ||
|FP977= | |FP977= | ||
|all_trans=AK092287:7 BC075847:51 ENST00000466186.2:97 | |all_trans=AK092287:7 BC075847:51 ENST00000466186.2:97 | ||
| − | |chr= | + | |chr=chr17 |
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=7 | |distance=7 | ||
|distance_to_tss=69126 | |distance_to_tss=69126 | ||
| − | |end= | + | |end=17136241 |
|end_of_center_position=17136241 | |end_of_center_position=17136241 | ||
|entrez_id=79726 | |entrez_id=79726 | ||
| Line 26: | Line 26: | ||
|p90-120= | |p90-120= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=17136240 |
|start_of_center_position=17136240 | |start_of_center_position=17136240 | ||
| − | |strand= | + | |strand=+ |
|tata_box=1(AGCCCTAAAAGA,-,0.00) | |tata_box=1(AGCCCTAAAAGA,-,0.00) | ||
|transcript_name=AK092287 | |transcript_name=AK092287 | ||
Revision as of 10:09, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17136240 |
|---|---|
| End of the center position in the TSS region: | 17136241 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK092287 |
|---|---|
| Distance: | 7 |
| Num_trans: | 3 |
| All_trans: | AK092287:7 BC075847:51 ENST00000466186.2:97 |
TATA-Box annotation
| Distance to TSS: | 69126 |
|---|---|
| Nearest PromoterID: | NM_030581 |
| Entrez ID: | 79726 |
| Nearest Unigene: | Hs.280951 |
| Nearest Refseq: | NM_030581 |
| Nearest Ensembl: | ENSG00000103091 |
| Gene Name: | myosin phosphatase Rho interacting protein |
| Gene Alias: | CDW12|FP977|p90-120 |
| Gene Description: | WD repeat domain 59 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 1(AGCCCTAAAAGA,-,0.00) |
