Difference between revisions of "TSS:Hg 237646.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance=111 | |distance=111 | ||
|distance_to_tss=5866 | |distance_to_tss=5866 | ||
| − | |end= | + | |end=48619295 |
|end_of_center_position=48619295 | |end_of_center_position=48619295 | ||
|entrez_id=2091 | |entrez_id=2091 | ||
| Line 26: | Line 26: | ||
|num_trans=27 | |num_trans=27 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=48619294 |
|start_of_center_position=48619294 | |start_of_center_position=48619294 | ||
|strand=- | |strand=- | ||
Revision as of 10:38, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 48619294 |
|---|---|
| End of the center position in the TSS region: | 48619295 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000550671.1 |
|---|---|
| Distance: | 111 |
| Num_trans: | 27 |
| All_trans: | ENST00000550671.1:111 ENST00000551749.5:112 ENST00000552705.5:112 ENST00000552588.5:114 ENST00000549920.6:117 NM_000979:117 NR_073022:117 NM_001270490:117 ENST00000549273.5:118 ENST00000549370.5:119 AK026558:119 BC021743:119 AK293386:119 D28461:119 ENST00000547892.1:120 AK091257:120 ENST00000547897.5:127 ENST00000552851.1:131 BC009708:131 BC051359:131 BC051837:131 ENST00000552347.5:132 ENST00000550645.5:132 L11566:137 LF367908:-159 MA603485:-159 ENST00000550973.5:168 |
TATA-Box annotation
| Distance to TSS: | 5866 |
|---|---|
| Nearest PromoterID: | NM_001436 |
| Entrez ID: | 2091 |
| Nearest Unigene: | Hs.299002 |
| Nearest Refseq: | NM_001436 |
| Nearest Ensembl: | ENSG00000105202 |
| Gene Name: | ribosomal protein L18 |
| Gene Alias: | FIB|FLRN|Nop1|RNU3IP1 |
| Gene Description: | fibrillarin |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -12(TCCTTTATAGGT,+,0.00) |
