Difference between revisions of "TSS:Hg 242195.1"
From referenceTSS
| Line 6: | Line 6: | ||
|Ptg-10= | |Ptg-10= | ||
|all_trans=AB384168:33 KJ902454:33 ENST00000461883.5:-82 BC132875:-82 BC144190:-82 ENST00000537639.5:-112 NR_134477:-112 | |all_trans=AB384168:33 KJ902454:33 ENST00000461883.5:-82 BC132875:-82 BC144190:-82 ENST00000537639.5:-112 NR_134477:-112 | ||
| − | |chr= | + | |chr=chr7 |
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=33 | |distance=33 | ||
|distance_to_tss=-28 | |distance_to_tss=-28 | ||
| − | |end= | + | |end=140602430 |
|end_of_center_position=140602430 | |end_of_center_position=140602430 | ||
|entrez_id=2289 | |entrez_id=2289 | ||
| Line 29: | Line 29: | ||
|num_trans=7 | |num_trans=7 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=140602429 |
|start_of_center_position=140602429 | |start_of_center_position=140602429 | ||
|strand=- | |strand=- | ||
|transcript_name=AB384168 KJ902454 | |transcript_name=AB384168 KJ902454 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_242195.1 | |tss_id=hg_242195.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:22, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 140602429 |
|---|---|
| End of the center position in the TSS region: | 140602430 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB384168 KJ902454 |
|---|---|
| Distance: | 33 |
| Num_trans: | 7 |
| All_trans: | AB384168:33 KJ902454:33 ENST00000461883.5:-82 BC132875:-82 BC144190:-82 ENST00000537639.5:-112 NR_134477:-112 |
TATA-Box annotation
| Distance to TSS: | -28 |
|---|---|
| Nearest PromoterID: | NM_004117 |
| Entrez ID: | 2289 |
| Nearest Unigene: | Hs.407190 |
| Nearest Refseq: | NM_004117 |
| Nearest Ensembl: | ENSG00000096060 |
| Gene Name: | DENN domain containing 2A |
| Gene Alias: | AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 |
| Gene Description: | FKBP prolyl isomerase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
