Difference between revisions of "TSS:Hg 242723.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=AY363099:-1 ENST00000381869.5:-41 ENST00000523718.5:-41 NM_001001925:-41 NM_001001924:-41 AK310871:-41 FJ458441:-131 ENST00000262102.10:208 BC136320:208 BC171765:208 NM_001363057:-218 NM_001363060:-218 NM_001363059:-348 NM_001363058:-348 NM_001363062:-348 NR_156437:-348 FJ458440:-353 LF213941:-362 MA449518:-362 LF208094:-363 MA443671:-363 | |all_trans=AY363099:-1 ENST00000381869.5:-41 ENST00000523718.5:-41 NM_001001925:-41 NM_001001924:-41 AK310871:-41 FJ458441:-131 ENST00000262102.10:208 BC136320:208 BC171765:208 NM_001363057:-218 NM_001363060:-218 NM_001363059:-348 NM_001363058:-348 NM_001363062:-348 NR_156437:-348 FJ458440:-353 LF213941:-362 MA449518:-362 LF208094:-363 MA443671:-363 | ||
| − | |chr= | + | |chr=chr8 |
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=-1 | |distance=-1 | ||
|distance_to_tss=115 | |distance_to_tss=115 | ||
| − | |end= | + | |end=17800876 |
|end_of_center_position=17800876 | |end_of_center_position=17800876 | ||
|entrez_id=80028 | |entrez_id=80028 | ||
| Line 24: | Line 24: | ||
|num_trans=21 | |num_trans=21 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=17800875 |
|start_of_center_position=17800875 | |start_of_center_position=17800875 | ||
|strand=- | |strand=- | ||
Revision as of 12:34, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 17800875 |
|---|---|
| End of the center position in the TSS region: | 17800876 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AY363099 |
|---|---|
| Distance: | -1 |
| Num_trans: | 21 |
| All_trans: | AY363099:-1 ENST00000381869.5:-41 ENST00000523718.5:-41 NM_001001925:-41 NM_001001924:-41 AK310871:-41 FJ458441:-131 ENST00000262102.10:208 BC136320:208 BC171765:208 NM_001363057:-218 NM_001363060:-218 NM_001363059:-348 NM_001363058:-348 NM_001363062:-348 NR_156437:-348 FJ458440:-353 LF213941:-362 MA449518:-362 LF208094:-363 MA443671:-363 |
TATA-Box annotation
| Distance to TSS: | 115 |
|---|---|
| Nearest PromoterID: | NM_001321213 |
| Entrez ID: | 80028 |
| Nearest Unigene: | Hs.623974 |
| Nearest Refseq: | NM_024963 |
| Nearest Ensembl: | ENSG00000155034 |
| Gene Name: | microtubule associated scaffold protein 1 |
| Gene Alias: | Fbl18 |
| Gene Description: | F-box and leucine rich repeat protein 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
