Difference between revisions of "TSS:Hg 243018.1"
From referenceTSS
| Line 5: | Line 5: | ||
|MDM= | |MDM= | ||
|all_trans=ENST00000636434.1:89 AK310471:89 BC030595:109 ENST00000374806.2:141 NM_147180:141 AF400667:141 AK057524:150 AK302547:150 BC066299:171 JF432717:180 KJ891875:180 AF085237:189 AF145026:189 | |all_trans=ENST00000636434.1:89 AK310471:89 BC030595:109 ENST00000374806.2:141 NM_147180:141 AF400667:141 AK057524:150 AK302547:150 BC066299:171 JF432717:180 KJ891875:180 AF085237:189 AF145026:189 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=89 | |distance=89 | ||
|distance_to_tss=1336 | |distance_to_tss=1336 | ||
| − | |end= | + | |end=101595110 |
|end_of_center_position=101595110 | |end_of_center_position=101595110 | ||
|entrez_id=57152 | |entrez_id=57152 | ||
| Line 28: | Line 28: | ||
|num_trans=13 | |num_trans=13 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=101595109 |
|start_of_center_position=101595109 | |start_of_center_position=101595109 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000636434.1 AK310471 | |transcript_name=ENST00000636434.1 AK310471 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243018.1 | |tss_id=hg_243018.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A1B0GUC7 | |uniprot_id=A0A1B0GUC7 | ||
}} | }} | ||
Revision as of 12:41, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101595109 |
|---|---|
| End of the center position in the TSS region: | 101595110 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000636434.1 AK310471 |
|---|---|
| Distance: | 89 |
| Num_trans: | 13 |
| All_trans: | ENST00000636434.1:89 AK310471:89 BC030595:109 ENST00000374806.2:141 NM_147180:141 AF400667:141 AK057524:150 AK302547:150 BC066299:171 JF432717:180 KJ891875:180 AF085237:189 AF145026:189 |
TATA-Box annotation
| Distance to TSS: | 1336 |
|---|---|
| Nearest PromoterID: | NM_020427 |
| Entrez ID: | 57152 |
| Nearest Unigene: | Hs.103505 |
| Nearest Refseq: | NM_020427 |
| Nearest Ensembl: | ENSG00000126233 |
| Gene Name: | protein phosphatase 3 regulatory subunit B, beta |
| Gene Alias: | ANUP|ARS|ArsB|LY6-MT|LY6LS|MDM |
| Gene Description: | secreted LY6/PLAUR domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
