Difference between revisions of "TSS:Hg 243523.1"
From referenceTSS
| Line 3: | Line 3: | ||
|TAN1= | |TAN1= | ||
|all_trans=AB462505:41 BC009316:-134 DQ596276:331 AK026170:-362 DQ593671:-421 | |all_trans=AB462505:41 BC009316:-134 DQ596276:331 AK026170:-362 DQ593671:-421 | ||
| − | |chr= | + | |chr=chrM |
|cpg_percent=0.195 | |cpg_percent=0.195 | ||
|distance=41 | |distance=41 | ||
|distance_to_tss=114 | |distance_to_tss=114 | ||
| − | |end= | + | |end=2671 |
|end_of_center_position=2670 | |end_of_center_position=2670 | ||
|entrez_id=4851 | |entrez_id=4851 | ||
| Line 27: | Line 27: | ||
|num_trans=5 | |num_trans=5 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=2667 |
|start_of_center_position=2669 | |start_of_center_position=2669 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=AB462505 | |transcript_name=AB462505 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 12:52, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 2669 |
|---|---|
| End of the center position in the TSS region: | 2670 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB462505 |
|---|---|
| Distance: | 41 |
| Num_trans: | 5 |
| All_trans: | AB462505:41 BC009316:-134 DQ596276:331 AK026170:-362 DQ593671:-421 |
TATA-Box annotation
| Distance to TSS: | 114 |
|---|---|
| Nearest PromoterID: | NM_017617 |
| Entrez ID: | 4851 |
| Nearest Unigene: | Hs.495473 |
| Nearest Refseq: | NM_017617 |
| Nearest Ensembl: | ENSG00000148400 |
| Gene Name: | NOTCH1 |
| Gene Alias: | AOS5|AOVD1|TAN1|hN1 |
| Gene Description: | notch receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.195 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
