Difference between revisions of "TSS:Hg 190000.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ABETA= | ||
| + | |ABPP= | ||
| + | |AD1= | ||
| + | |APPI= | ||
| + | |CTFgamma= | ||
| + | |CVAP= | ||
| + | |PN-II= | ||
| + | |PN2= | ||
|all_trans=ENST00000359726.7:-23 NM_001136131:-23 uc011aci.3:-23 AK296229:-23 NM_000484:229 NM_001136130:229 NM_001204302:229 NM_001204303:229 NM_001204301:229 NM_201414:229 NM_201413:229 NM_001136129:229 ENST00000357903.7:262 uc002yma.4:262 M35675:279 ENST00000348990.9:282 uc002ymb.4:282 Y00264:282 AK297412:282 AK294534:282 AK298861:282 BC065529:298 BC065523:298 ENST00000354192.7:302 uc010glj.4:302 AF282245:302 ENST00000474136.5:303 uc061zhv.1:303 BC004369:303 X06989:311 AK297229:365 AK312326:365 ENST00000358918.7:382 uc021whz.2:382 ENST00000346798.7:395 ENST00000439274.6:395 uc002ylz.4:395 uc011ach.3:395 AB384791:424 EU832797:429 GQ129348:429 KJ901289:429 | |all_trans=ENST00000359726.7:-23 NM_001136131:-23 uc011aci.3:-23 AK296229:-23 NM_000484:229 NM_001136130:229 NM_001204302:229 NM_001204303:229 NM_001204301:229 NM_201414:229 NM_201413:229 NM_001136129:229 ENST00000357903.7:262 uc002yma.4:262 M35675:279 ENST00000348990.9:282 uc002ymb.4:282 Y00264:282 AK297412:282 AK294534:282 AK298861:282 BC065529:298 BC065523:298 ENST00000354192.7:302 uc010glj.4:302 AF282245:302 ENST00000474136.5:303 uc061zhv.1:303 BC004369:303 X06989:311 AK297229:365 AK312326:365 ENST00000358918.7:382 uc021whz.2:382 ENST00000346798.7:395 ENST00000439274.6:395 uc002ylz.4:395 uc011ach.3:395 AB384791:424 EU832797:429 GQ129348:429 KJ901289:429 | ||
|chr=chr21 | |chr=chr21 | ||
| Line 6: | Line 14: | ||
|distance_to_tss=51 | |distance_to_tss=51 | ||
|end=26171105 | |end=26171105 | ||
| + | |end_of_center_position=26171077 | ||
|entrez_id=351 | |entrez_id=351 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=AAA | + | |gene_alias=AAA |
|gene_description=amyloid beta precursor protein | |gene_description=amyloid beta precursor protein | ||
|gene_id=351 | |gene_id=351 | ||
| Line 24: | Line 33: | ||
|species=human | |species=human | ||
|start=26171048 | |start=26171048 | ||
| + | |start_of_center_position=26171076 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000359726.7 NM_001136131 uc011aci.3 AK296229 | |transcript_name=ENST00000359726.7 NM_001136131 uc011aci.3 AK296229 | ||
Revision as of 15:30, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26171076 |
|---|---|
| End of the center position in the TSS region: | 26171077 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000359726.7 NM_001136131 uc011aci.3 AK296229 |
|---|---|
| Distance: | -23 |
| Num_trans: | 42 |
| All_trans: | ENST00000359726.7:-23 NM_001136131:-23 uc011aci.3:-23 AK296229:-23 NM_000484:229 NM_001136130:229 NM_001204302:229 NM_001204303:229 NM_001204301:229 NM_201414:229 NM_201413:229 NM_001136129:229 ENST00000357903.7:262 uc002yma.4:262 M35675:279 ENST00000348990.9:282 uc002ymb.4:282 Y00264:282 AK297412:282 AK294534:282 AK298861:282 BC065529:298 BC065523:298 ENST00000354192.7:302 uc010glj.4:302 AF282245:302 ENST00000474136.5:303 uc061zhv.1:303 BC004369:303 X06989:311 AK297229:365 AK312326:365 ENST00000358918.7:382 uc021whz.2:382 ENST00000346798.7:395 ENST00000439274.6:395 uc002ylz.4:395 uc011ach.3:395 AB384791:424 EU832797:429 GQ129348:429 KJ901289:429 |
TATA-Box annotation
| Distance to TSS: | 51 |
|---|---|
| Nearest PromoterID: | NM_001136131 |
| Entrez ID: | 351 |
| Nearest Unigene: | Hs.434980 |
| Nearest Refseq: | NM_000484 |
| Nearest Ensembl: | ENSG00000142192 |
| Gene Name: | amyloid beta precursor protein |
| Gene Alias: | AAA |
| Gene Description: | amyloid beta precursor protein |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
