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Difference between revisions of "TSS:Hg 57647.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AB385392:-29 CU691986:-34 KJ898412:-34 ENST00000510623.1:55 ENST00000512878.1:-163
+
|all_trans=HGNC:18757
 
|chr=chr5
 
|chr=chr5
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 22: Line 22:
 
|nearest_refseq=NM_031952
 
|nearest_refseq=NM_031952
 
|nearest_unigene=Hs.50499
 
|nearest_unigene=Hs.50499
|num_trans=5
+
|num_trans=22836
 
|species=human
 
|species=human
 
|start=95731887
 
|start=95731887

Latest revision as of 03:24, 22 July 2021

Basic information about the TSS


TSS ID:hg_57647.1
Species:human
Chr:chr5
TSS Classification:yes
Start:95731887
End:95731901
Strand:+
TSS Score:1
Start of the center position in the TSS region:95731894
End of the center position in the TSS region:95731895



Gene and protein annotation


Transcript_name:AB385392
Distance:-29
GeneID:22836
HGNC/MGI_ID:HGNC:18757
UniProt_ID:
Gene_name:Rho related BTB domain containing 3
Gene_symbol:RHOBTB3
Gene_synonyms:KIAA0878
Gene_source:HGNC:18757



Transcript annotation


Transcript_name:AB385392
Distance:-29
Num_trans:22836
All_trans:HGNC:18757



TATA-Box annotation


Distance to TSS:208
Nearest PromoterID:NM_001349303
Entrez ID:83890
Nearest Unigene:Hs.50499
Nearest Refseq:NM_031952
Nearest Ensembl:ENSG00000145757
Gene Name:Rho related BTB domain containing 3
Gene Alias:NYD-SP16
Gene Description:spermatogenesis associated 9
Gene Type:protein-coding
CpG%:0.09
GC%:0.656716
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):