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Difference between revisions of "TSS:Mm 100026.1"

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Line 6: Line 6:
 
|MMAC8=
 
|MMAC8=
 
|Pigr4=
 
|Pigr4=
|all_trans=ENSMUST00000117948.1:419
+
|all_trans=MGI:3649375
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 29: Line 29:
 
|nearest_refseq=NM_170758
 
|nearest_refseq=NM_170758
 
|nearest_unigene=Mm.294439
 
|nearest_unigene=Mm.294439
|num_trans=1
+
|num_trans=
 
|species=mouse
 
|species=mouse
 
|start=114908269
 
|start=114908269

Latest revision as of 10:29, 26 July 2021

Basic information about the TSS


TSS ID:mm_100026.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:114908269
End:114908312
Strand:+
TSS Score:1
Start of the center position in the TSS region:114908290
End of the center position in the TSS region:114908291



Gene and protein annotation


Transcript_name:ENSMUST00000117948.1
Distance:419
GeneID:
HGNC/MGI_ID:MGI:3649375
UniProt_ID:
Gene_name:basic transcription factor 3, pseudogene 13
Gene_symbol:Btf3-ps13
Gene_synonyms:Gm11698
Gene_source:MGI:3649375



Transcript annotation


Transcript_name:ENSMUST00000117948.1
Distance:419
Num_trans:
All_trans:MGI:3649375



TATA-Box annotation


Distance to TSS:18250
Nearest PromoterID:NM_170758
Entrez ID:217303
Nearest Unigene:Mm.294439
Nearest Refseq:NM_170758
Nearest Ensembl:ENSMUSG00000034652
Gene Name:basic transcription factor 3, pseudogene 13
Gene Alias:B230315M08Rik|Clm8|LMIR1|MAIR-1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1
Gene Description:CD300A molecule
Gene Type:protein-coding
CpG%:0.015
GC%:0.542289
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):