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Difference between revisions of "TSS:Hg 111702.1"

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(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=247 |entrez_id=7073 |gc_percent=0.706468 |gene_alias=TCBP|TIAR |gene_description=TIA1 cytotoxic granule associated RNA binding pr...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|TIAR=
 +
|all_trans=AK291239:115 ENST00000479729.1:145 uc057wiw.1:145 AK290984:149 ENST00000489822.5:-177 uc057win.1:-177 AL833106:-177 AK290695:-195 ENST00000497671.5:-242 NM_001033925:-242 NM_003252:-242 uc057wio.1:-242 BC030025:-242 ENST00000436547.6:267 uc001lei.2:267 M96954:267 ENST00000369093.6:282 uc001lej.2:282 AK295243:303 AY633610:304 AB527493:310
 +
|chr=chr10
 
|cpg_percent=0.1
 
|cpg_percent=0.1
 +
|distance=115
 
|distance_to_tss=247
 
|distance_to_tss=247
 +
|end=119596787
 
|entrez_id=7073
 
|entrez_id=7073
 
|gc_percent=0.706468
 
|gc_percent=0.706468
 
|gene_alias=TCBP|TIAR
 
|gene_alias=TCBP|TIAR
 
|gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1
 
|gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1
|gene_name=TIAL1
+
|gene_id=7073
 +
|gene_name=TIA1 cytotoxic granule-associated RNA binding protein-like 1
 +
|gene_source=HGNC:11804
 +
|gene_symbol=TIAL1
 +
|gene_synonyms=TIAR
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=HGNC:11804
 
|nearest_ensembl=ENSG00000151923
 
|nearest_ensembl=ENSG00000151923
 
|nearest_promoter_id=NM_001323964
 
|nearest_promoter_id=NM_001323964
 
|nearest_refseq=NM_003252
 
|nearest_refseq=NM_003252
 
|nearest_unigene=Hs.501203
 
|nearest_unigene=Hs.501203
 +
|num_trans=21
 +
|species=human
 +
|start=119596776
 +
|strand=-
 +
|transcript_name=AK291239
 +
|tss_classification=yes
 
|tss_id=hg_111702.1
 
|tss_id=hg_111702.1
 +
|tss_score=1
 +
|uniprot_id=A8K5C4
 
}}
 
}}

Revision as of 02:04, 9 March 2018

Basic information about the TSS


TSS ID:hg_111702.1
Species:human
Chr:chr10
TSS Classification:yes
Start:119596776
End:119596787
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:AK291239
Distance:115
GeneID:7073
HGNC/MGI_ID:HGNC:11804
UniProt_ID:A8K5C4
Gene_name:TIA1 cytotoxic granule-associated RNA binding protein-like 1
Gene_symbol:TIAL1
Gene_synonyms:TIAR
Gene_source:HGNC:11804



Transcript annotation


Transcript_name:AK291239
Distance:115
Num_trans:21
All_trans:AK291239:115 ENST00000479729.1:145 uc057wiw.1:145 AK290984:149 ENST00000489822.5:-177 uc057win.1:-177 AL833106:-177 AK290695:-195 ENST00000497671.5:-242 NM_001033925:-242 NM_003252:-242 uc057wio.1:-242 BC030025:-242 ENST00000436547.6:267 uc001lei.2:267 M96954:267 ENST00000369093.6:282 uc001lej.2:282 AK295243:303 AY633610:304 AB527493:310



TATA-Box annotation


Distance to TSS:247
Nearest PromoterID:NM_001323964
Entrez ID:7073
Nearest Unigene:Hs.501203
Nearest Refseq:NM_003252
Nearest Ensembl:ENSG00000151923
Gene Name:TIA1 cytotoxic granule-associated RNA binding protein-like 1
Gene Alias:TCBP
Gene Description:TIA1 cytotoxic granule associated RNA binding protein like 1
Gene Type:protein-coding
CpG%:0.1
GC%:0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):