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Difference between revisions of "TSS:Hg 111704.1"

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(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=67 |entrez_id=7073 |gc_percent=0.577114 |gene_alias=TCBP|TIAR |gene_description=TIA1 cytotoxic granule associated RNA binding pr...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|TIAR=
 +
|all_trans=ENST00000489822.5:0 uc057win.1:0 AL833106:0 AK290695:-12 ENST00000497671.5:-59 NM_001033925:-59 NM_003252:-59 uc057wio.1:-59 BC030025:-59 AK291239:293 ENST00000479729.1:323 uc057wiw.1:323 AK290984:327 ENST00000436547.6:445 uc001lei.2:445 M96954:445 ENST00000369093.6:460 uc001lej.2:460 AK295243:481 AY633610:482 AB527493:488
 +
|chr=chr10
 
|cpg_percent=0.06
 
|cpg_percent=0.06
 +
|distance=0
 
|distance_to_tss=67
 
|distance_to_tss=67
 +
|end=119596970
 
|entrez_id=7073
 
|entrez_id=7073
 
|gc_percent=0.577114
 
|gc_percent=0.577114
 
|gene_alias=TCBP|TIAR
 
|gene_alias=TCBP|TIAR
 
|gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1
 
|gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1
|gene_name=TIAL1
+
|gene_id=7073
 +
|gene_name=TIA1 cytotoxic granule-associated RNA binding protein-like 1
 +
|gene_source=HGNC:11804
 +
|gene_symbol=TIAL1
 +
|gene_synonyms=TIAR
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=HGNC:11804
 
|nearest_ensembl=ENSG00000151923
 
|nearest_ensembl=ENSG00000151923
 
|nearest_promoter_id=NM_001323964
 
|nearest_promoter_id=NM_001323964
 
|nearest_refseq=NM_003252
 
|nearest_refseq=NM_003252
 
|nearest_unigene=Hs.501203
 
|nearest_unigene=Hs.501203
 +
|num_trans=21
 +
|species=human
 +
|start=119596954
 +
|strand=-
 +
|transcript_name=ENST00000489822.5 uc057win.1 AL833106
 +
|tss_classification=yes
 
|tss_id=hg_111704.1
 
|tss_id=hg_111704.1
 +
|tss_score=1
 +
|uniprot_id=
 
}}
 
}}

Revision as of 02:04, 9 March 2018

Basic information about the TSS


TSS ID:hg_111704.1
Species:human
Chr:chr10
TSS Classification:yes
Start:119596954
End:119596970
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENST00000489822.5 uc057win.1 AL833106
Distance:0
GeneID:7073
HGNC/MGI_ID:HGNC:11804
UniProt_ID:
Gene_name:TIA1 cytotoxic granule-associated RNA binding protein-like 1
Gene_symbol:TIAL1
Gene_synonyms:TIAR
Gene_source:HGNC:11804



Transcript annotation


Transcript_name:ENST00000489822.5 uc057win.1 AL833106
Distance:0
Num_trans:21
All_trans:ENST00000489822.5:0 uc057win.1:0 AL833106:0 AK290695:-12 ENST00000497671.5:-59 NM_001033925:-59 NM_003252:-59 uc057wio.1:-59 BC030025:-59 AK291239:293 ENST00000479729.1:323 uc057wiw.1:323 AK290984:327 ENST00000436547.6:445 uc001lei.2:445 M96954:445 ENST00000369093.6:460 uc001lej.2:460 AK295243:481 AY633610:482 AB527493:488



TATA-Box annotation


Distance to TSS:67
Nearest PromoterID:NM_001323964
Entrez ID:7073
Nearest Unigene:Hs.501203
Nearest Refseq:NM_003252
Nearest Ensembl:ENSG00000151923
Gene Name:TIA1 cytotoxic granule-associated RNA binding protein-like 1
Gene Alias:TCBP
Gene Description:TIA1 cytotoxic granule associated RNA binding protein like 1
Gene Type:protein-coding
CpG%:0.06
GC%:0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):