Difference between revisions of "TSS:Hg 111704.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=67 |entrez_id=7073 |gc_percent=0.577114 |gene_alias=TCBP|TIAR |gene_description=TIA1 cytotoxic granule associated RNA binding pr...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TIAR= | ||
| + | |all_trans=ENST00000489822.5:0 uc057win.1:0 AL833106:0 AK290695:-12 ENST00000497671.5:-59 NM_001033925:-59 NM_003252:-59 uc057wio.1:-59 BC030025:-59 AK291239:293 ENST00000479729.1:323 uc057wiw.1:323 AK290984:327 ENST00000436547.6:445 uc001lei.2:445 M96954:445 ENST00000369093.6:460 uc001lej.2:460 AK295243:481 AY633610:482 AB527493:488 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| + | |distance=0 | ||
|distance_to_tss=67 | |distance_to_tss=67 | ||
| + | |end=119596970 | ||
|entrez_id=7073 | |entrez_id=7073 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
|gene_alias=TCBP|TIAR | |gene_alias=TCBP|TIAR | ||
|gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1 | |gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1 | ||
| − | |gene_name=TIAL1 | + | |gene_id=7073 |
| + | |gene_name=TIA1 cytotoxic granule-associated RNA binding protein-like 1 | ||
| + | |gene_source=HGNC:11804 | ||
| + | |gene_symbol=TIAL1 | ||
| + | |gene_synonyms=TIAR | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11804 | ||
|nearest_ensembl=ENSG00000151923 | |nearest_ensembl=ENSG00000151923 | ||
|nearest_promoter_id=NM_001323964 | |nearest_promoter_id=NM_001323964 | ||
|nearest_refseq=NM_003252 | |nearest_refseq=NM_003252 | ||
|nearest_unigene=Hs.501203 | |nearest_unigene=Hs.501203 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=119596954 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000489822.5 uc057win.1 AL833106 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_111704.1 | |tss_id=hg_111704.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 02:04, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000489822.5 uc057win.1 AL833106 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000489822.5:0 uc057win.1:0 AL833106:0 AK290695:-12 ENST00000497671.5:-59 NM_001033925:-59 NM_003252:-59 uc057wio.1:-59 BC030025:-59 AK291239:293 ENST00000479729.1:323 uc057wiw.1:323 AK290984:327 ENST00000436547.6:445 uc001lei.2:445 M96954:445 ENST00000369093.6:460 uc001lej.2:460 AK295243:481 AY633610:482 AB527493:488 |
TATA-Box annotation
| Distance to TSS: | 67 |
|---|---|
| Nearest PromoterID: | NM_001323964 |
| Entrez ID: | 7073 |
| Nearest Unigene: | Hs.501203 |
| Nearest Refseq: | NM_003252 |
| Nearest Ensembl: | ENSG00000151923 |
| Gene Name: | TIA1 cytotoxic granule-associated RNA binding protein-like 1 |
| Gene Alias: | TCBP |
| Gene Description: | TIA1 cytotoxic granule associated RNA binding protein like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
