Difference between revisions of "TSS:Hg 112299.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-153 |entrez_id=283229 |gc_percent=0.646766 |gene_alias=EFCAB4A |gene_description=calcium release activated channel regulator 2...") |
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{{TSSDetail | {{TSSDetail | ||
+ | |all_trans=ENST00000450448.5:151 NM_173584:151 NM_001286606:151 uc031xct.2:151 ENST00000530737.2:358 uc057xoh.1:358 BC033196:370 ENST00000525077.1:398 uc001lrv.3:398 BC073821:-487 CU689616:498 HQ447620:498 KJ900543:498 GU952799:499 | ||
+ | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
+ | |distance=151 | ||
|distance_to_tss=-153 | |distance_to_tss=-153 | ||
+ | |end=828109 | ||
|entrez_id=283229 | |entrez_id=283229 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
|gene_alias=EFCAB4A | |gene_alias=EFCAB4A | ||
|gene_description=calcium release activated channel regulator 2B | |gene_description=calcium release activated channel regulator 2B | ||
− | |gene_name=CRACR2B | + | |gene_id=283229 |
+ | |gene_name=calcium release activated channel regulator 2B | ||
+ | |gene_source=HGNC:28703 | ||
+ | |gene_symbol=CRACR2B | ||
+ | |gene_synonyms=MGC45840 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
+ | |hgnc_mgi_id=HGNC:28703 | ||
|nearest_ensembl=ENSG00000177685 | |nearest_ensembl=ENSG00000177685 | ||
|nearest_promoter_id=NM_173584 | |nearest_promoter_id=NM_173584 | ||
|nearest_refseq=NM_173584 | |nearest_refseq=NM_173584 | ||
|nearest_unigene=Hs.660936 | |nearest_unigene=Hs.660936 | ||
+ | |num_trans=14 | ||
+ | |species=human | ||
+ | |start=828104 | ||
+ | |strand=+ | ||
+ | |transcript_name=ENST00000450448.5 NM_173584 NM_001286606 uc031xct.2 | ||
+ | |tss_classification=yes | ||
|tss_id=hg_112299.1 | |tss_id=hg_112299.1 | ||
+ | |tss_score=1 | ||
+ | |uniprot_id=Q8N4Y2 | ||
}} | }} |
Revision as of 02:29, 9 March 2018
Basic information about the TSS
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Start of the center position in the TSS region: | |
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End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000450448.5 NM_173584 NM_001286606 uc031xct.2 |
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Distance: | 151 |
Num_trans: | 14 |
All_trans: | ENST00000450448.5:151 NM_173584:151 NM_001286606:151 uc031xct.2:151 ENST00000530737.2:358 uc057xoh.1:358 BC033196:370 ENST00000525077.1:398 uc001lrv.3:398 BC073821:-487 CU689616:498 HQ447620:498 KJ900543:498 GU952799:499 |
TATA-Box annotation
Distance to TSS: | -153 |
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Nearest PromoterID: | NM_173584 |
Entrez ID: | 283229 |
Nearest Unigene: | Hs.660936 |
Nearest Refseq: | NM_173584 |
Nearest Ensembl: | ENSG00000177685 |
Gene Name: | calcium release activated channel regulator 2B |
Gene Alias: | EFCAB4A |
Gene Description: | calcium release activated channel regulator 2B |
Gene Type: | protein-coding |
CpG%: | 0.005 |
GC%: | 0.646766 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |