Difference between revisions of "TSS:Hg 220150.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000371380.7:8 uc057uyg.1:8 AF190642:8 BC140705:183 BC144286:183 AB384613:243 |chr=chr10 |cpg_percent=0.005 |distance=8 |distance_to_tss=36815 |end...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PLCE= | ||
| + | |PPLC= | ||
|all_trans=ENST00000371380.7:8 uc057uyg.1:8 AF190642:8 BC140705:183 BC144286:183 AB384613:243 | |all_trans=ENST00000371380.7:8 uc057uyg.1:8 AF190642:8 BC140705:183 BC144286:183 AB384613:243 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=36815 | |distance_to_tss=36815 | ||
|end=94030804 | |end=94030804 | ||
| + | |end_of_center_position=94030804 | ||
|entrez_id=51196 | |entrez_id=51196 | ||
|gc_percent=0.328358 | |gc_percent=0.328358 | ||
| − | |gene_alias=NPHS3 | + | |gene_alias=NPHS3 |
|gene_description=phospholipase C epsilon 1 | |gene_description=phospholipase C epsilon 1 | ||
|gene_id=51196 | |gene_id=51196 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=94030803 | |start=94030803 | ||
| + | |start_of_center_position=94030803 | ||
|strand=+ | |strand=+ | ||
|tata_box="83(GCCTCTTAATGC,-,0.00)" | |tata_box="83(GCCTCTTAATGC,-,0.00)" | ||
Revision as of 07:02, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 94030803 |
|---|---|
| End of the center position in the TSS region: | 94030804 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371380.7 uc057uyg.1 AF190642 |
|---|---|
| Distance: | 8 |
| Num_trans: | 6 |
| All_trans: | ENST00000371380.7:8 uc057uyg.1:8 AF190642:8 BC140705:183 BC144286:183 AB384613:243 |
TATA-Box annotation
| Distance to TSS: | 36815 |
|---|---|
| Nearest PromoterID: | NM_001288989 |
| Entrez ID: | 51196 |
| Nearest Unigene: | Hs.655033 |
| Nearest Refseq: | NM_016341 |
| Nearest Ensembl: | ENSG00000138193 |
| Gene Name: | phospholipase C epsilon 1 |
| Gene Alias: | NPHS3 |
| Gene Description: | phospholipase C epsilon 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.328358 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "83(GCCTCTTAATGC,-,0.00)" |
