Difference between revisions of "TSS:Hg 224500.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000392870.2:41 uc001led.4:41 BC018116:41 NM_005308:137 BC064506:137 L15388:143 AK309761:149 AK313012:290 AB590773:370 |chr=chr10 |cpg_percent=0.09...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-142 | |distance_to_tss=-142 | ||
|end=119207548 | |end=119207548 | ||
| + | |end_of_center_position=119207543 | ||
|entrez_id=2869 | |entrez_id=2869 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=119207537 | |start=119207537 | ||
| + | |start_of_center_position=119207542 | ||
|strand=+ | |strand=+ | ||
|tata_box="39(AGGCATTAAAGC,-,0.00)" | |tata_box="39(AGGCATTAAAGC,-,0.00)" | ||
Revision as of 09:38, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 119207542 |
|---|---|
| End of the center position in the TSS region: | 119207543 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000392870.2 uc001led.4 BC018116 |
|---|---|
| Distance: | 41 |
| Num_trans: | 9 |
| All_trans: | ENST00000392870.2:41 uc001led.4:41 BC018116:41 NM_005308:137 BC064506:137 L15388:143 AK309761:149 AK313012:290 AB590773:370 |
TATA-Box annotation
| Distance to TSS: | -142 |
|---|---|
| Nearest PromoterID: | NM_005308 |
| Entrez ID: | 2869 |
| Nearest Unigene: | Hs.524625 |
| Nearest Refseq: | NM_005308 |
| Nearest Ensembl: | ENSG00000198873 |
| Gene Name: | G protein-coupled receptor kinase 5 |
| Gene Alias: | GPRK5 |
| Gene Description: | G protein-coupled receptor kinase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "39(AGGCATTAAAGC,-,0.00)" |
