Difference between revisions of "TSS:Hg 101077.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=32 |entrez_id=9630 |gc_percent=0.59204 |gene_alias=- |gene_description=G protein subunit alpha 14 |gene_name=GNA14 |gene_type=p...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000341700.6:-18 uc004aku.4:-18 BC027886:-18 NM_004297:-27 AK312460:-27 AF105201:348 DQ890949:482 DQ890954:482 EU176237:482 DQ894116:482 KJ905380:485 AF493903:486 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=-18 | ||
|distance_to_tss=32 | |distance_to_tss=32 | ||
| + | |end=77648289 | ||
|entrez_id=9630 | |entrez_id=9630 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=G protein subunit alpha 14 | |gene_description=G protein subunit alpha 14 | ||
| − | |gene_name=GNA14 | + | |gene_id=9630 |
| + | |gene_name=G protein subunit alpha 14 | ||
| + | |gene_source=HGNC:4382 | ||
| + | |gene_symbol=GNA14 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4382 | ||
|nearest_ensembl=ENSG00000156049 | |nearest_ensembl=ENSG00000156049 | ||
|nearest_promoter_id=NM_004297 | |nearest_promoter_id=NM_004297 | ||
|nearest_refseq=NM_004297 | |nearest_refseq=NM_004297 | ||
|nearest_unigene=Hs.657795 | |nearest_unigene=Hs.657795 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=77648278 | ||
| + | |strand=- | ||
|tata_box="-72(CCACTTAGAGCC,+,0.00)" | |tata_box="-72(CCACTTAGAGCC,+,0.00)" | ||
| + | |transcript_name=ENST00000341700.6 uc004aku.4 BC027886 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101077.1 | |tss_id=hg_101077.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O95837 | ||
}} | }} | ||
Revision as of 18:27, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000341700.6 uc004aku.4 BC027886 |
|---|---|
| Distance: | -18 |
| Num_trans: | 12 |
| All_trans: | ENST00000341700.6:-18 uc004aku.4:-18 BC027886:-18 NM_004297:-27 AK312460:-27 AF105201:348 DQ890949:482 DQ890954:482 EU176237:482 DQ894116:482 KJ905380:485 AF493903:486 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_004297 |
| Entrez ID: | 9630 |
| Nearest Unigene: | Hs.657795 |
| Nearest Refseq: | NM_004297 |
| Nearest Ensembl: | ENSG00000156049 |
| Gene Name: | G protein subunit alpha 14 |
| Gene Alias: | - |
| Gene Description: | G protein subunit alpha 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-72(CCACTTAGAGCC,+,0.00)" |
