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Difference between revisions of "TSS:Mm 99266.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000128260.8:0 BC036348:0 AK003810:22 ENSMUST00000122006.7:38 AF146523:38 BC051201:38 BC069992:39 AF209906:40 AJ250490:40 ENSMUST00000149585.7:41 NM_019444:-50 ENSMUST00000149006.1:-72 ENSMUST00000151830.1:176 ENSMUST00000129680.7:-356
+
|all_trans=MGI:1859650
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.115
 
|cpg_percent=0.115
Line 22: Line 22:
 
|nearest_refseq=NM_019444
 
|nearest_refseq=NM_019444
 
|nearest_unigene=Mm.260698
 
|nearest_unigene=Mm.260698
|num_trans=14
+
|num_trans=54409
 
|species=mouse
 
|species=mouse
 
|start=101246383
 
|start=101246383
 
|start_of_center_position=101246387
 
|start_of_center_position=101246387
 
|strand=+
 
|strand=+
|transcript_name=ENSMUST00000128260.8 BC036348
+
|transcript_name=ENSMUST00000128260.8
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=mm_99266.1
 
|tss_id=mm_99266.1

Latest revision as of 19:22, 28 July 2021

Basic information about the TSS


TSS ID:mm_99266.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101246383
End:101246391
Strand:+
TSS Score:1
Start of the center position in the TSS region:101246387
End of the center position in the TSS region:101246388



Gene and protein annotation


Transcript_name:ENSMUST00000128260.8
Distance:0
GeneID:54409
HGNC/MGI_ID:MGI:1859650
UniProt_ID:E9Q0S5
Gene_name:receptor (calcitonin) activity modifying protein 2
Gene_symbol:Ramp2
Gene_synonyms:
Gene_source:MGI:1859650



Transcript annotation


Transcript_name:ENSMUST00000128260.8
Distance:0
Num_trans:54409
All_trans:MGI:1859650



TATA-Box annotation


Distance to TSS:53
Nearest PromoterID:NM_019444
Entrez ID:54409
Nearest Unigene:Mm.260698
Nearest Refseq:NM_019444
Nearest Ensembl:ENSMUSG00000001240
Gene Name:receptor (calcitonin) activity modifying protein 2
Gene Alias:-
Gene Description:receptor (calcitonin) activity modifying protein 2
Gene Type:protein-coding
CpG%:0.115
GC%:0.766169
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):