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Difference between revisions of "TSS:Mm 99367.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000156842.1:0 AK172600:0 AK078552:0 AK142226:0 BC065064:0 AK170616:0 ENSMUST00000129741.1:1 AK220485:-15 BC132445:-40 NM_144831:-56 AK153829:-56 ENSMUST00000039152.13:-62 ENSMUST00000125409.1:-93 LF198903:-94 MA434480:-94
+
|all_trans=MGI:1306823
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.095
 
|cpg_percent=0.095
Line 24: Line 24:
 
|nearest_refseq=NM_144831
 
|nearest_refseq=NM_144831
 
|nearest_unigene=Mm.28186
 
|nearest_unigene=Mm.28186
|num_trans=15
+
|num_trans=217207
 
|species=mouse
 
|species=mouse
 
|start=101733011
 
|start=101733011

Latest revision as of 19:24, 28 July 2021

Basic information about the TSS


TSS ID:mm_99367.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101733011
End:101733040
Strand:+
TSS Score:1
Start of the center position in the TSS region:101733025
End of the center position in the TSS region:101733026



Gene and protein annotation


Transcript_name:ENSMUST00000156842.1 AK172600 AK078552 AK142226 BC065064 AK170616
Distance:0
GeneID:217207
HGNC/MGI_ID:MGI:1306823
UniProt_ID:Q3UQQ4
Gene_name:DEAH (Asp-Glu-Ala-His) box polypeptide 8
Gene_symbol:Dhx8
Gene_synonyms:Ddx8 RNA_helicase mDEAH6
Gene_source:MGI:1306823



Transcript annotation


Transcript_name:ENSMUST00000156842.1 AK172600 AK078552 AK142226 BC065064 AK170616
Distance:0
Num_trans:217207
All_trans:MGI:1306823



TATA-Box annotation


Distance to TSS:70
Nearest PromoterID:NM_144831
Entrez ID:217207
Nearest Unigene:Mm.28186
Nearest Refseq:NM_144831
Nearest Ensembl:ENSMUSG00000034931
Gene Name:DEAH (Asp-Glu-Ala-His) box polypeptide 8
Gene Alias:Ddx8|mDEAH6|mKIAA4096
Gene Description:DEAH (Asp-Glu-Ala-His) box polypeptide 8
Gene Type:protein-coding
CpG%:0.095
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):