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Difference between revisions of "TSS:Mm 99644.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC116642:6 U56734:-17 AK028157:-29 ENSMUST00000021038.4:-32 ENSMUST00000100335.9:-54 NM_008626:-54 ENSMUST00000126931.1:-57 AK054150:-57 LF198941:-58 MA434518:-58
+
|all_trans=MGI:107818
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 23: Line 23:
 
|nearest_refseq=NM_008626
 
|nearest_refseq=NM_008626
 
|nearest_unigene=Mm.235616
 
|nearest_unigene=Mm.235616
|num_trans=10
+
|num_trans=17534
 
|species=mouse
 
|species=mouse
 
|start=105292699
 
|start=105292699

Latest revision as of 19:30, 28 July 2021

Basic information about the TSS


TSS ID:mm_99644.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:105292699
End:105292714
Strand:+
TSS Score:1
Start of the center position in the TSS region:105292706
End of the center position in the TSS region:105292707



Gene and protein annotation


Transcript_name:BC116642
Distance:6
GeneID:17534
HGNC/MGI_ID:MGI:107818
UniProt_ID:Q14AX9
Gene_name:mannose receptor, C type 2
Gene_symbol:Mrc2
Gene_synonyms:Endo180 novel_lectin uPARAP
Gene_source:MGI:107818



Transcript annotation


Transcript_name:BC116642
Distance:6
Num_trans:17534
All_trans:MGI:107818



TATA-Box annotation


Distance to TSS:61
Nearest PromoterID:NM_008626
Entrez ID:17534
Nearest Unigene:Mm.235616
Nearest Refseq:NM_008626
Nearest Ensembl:ENSMUSG00000020695
Gene Name:mannose receptor, C type 2
Gene Alias:Endo180|mKIAA0709|uPARAP
Gene Description:mannose receptor, C type 2
Gene Type:protein-coding
CpG%:0.1
GC%:0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):