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Difference between revisions of "TSS:Hg 13970.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|UNR=
 
|UNR=
|all_trans=ENST00000525878.5:-49
+
|all_trans=HGNC:29905
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.005
 
|cpg_percent=0.005
Line 23: Line 23:
 
|nearest_refseq=NM_007158
 
|nearest_refseq=NM_007158
 
|nearest_unigene=Hs.69855
 
|nearest_unigene=Hs.69855
|num_trans=1
+
|num_trans=7812
 
|species=human
 
|species=human
 
|start=114758614
 
|start=114758614

Latest revision as of 07:57, 20 July 2021

Basic information about the TSS


TSS ID:hg_13970.1
Species:human
Chr:chr1
TSS Classification:yes
Start:114758614
End:114758627
Strand:-
TSS Score:1
Start of the center position in the TSS region:114758620
End of the center position in the TSS region:114758621



Gene and protein annotation


Transcript_name:ENST00000525878.5
Distance:-49
GeneID:7812
HGNC/MGI_ID:HGNC:29905
UniProt_ID:E9PKN4
Gene_name:cold shock domain containing E1
Gene_symbol:CSDE1
Gene_synonyms:D1S155E UNR
Gene_source:HGNC:29905



Transcript annotation


Transcript_name:ENST00000525878.5
Distance:-49
Num_trans:7812
All_trans:HGNC:29905



TATA-Box annotation


Distance to TSS:-571
Nearest PromoterID:NM_001242891
Entrez ID:7812
Nearest Unigene:Hs.69855
Nearest Refseq:NM_007158
Nearest Ensembl:ENSG00000009307
Gene Name:cold shock domain containing E1
Gene Alias:D1S155E|UNR
Gene Description:cold shock domain containing E1
Gene Type:protein-coding
CpG%:0.005
GC%:0.373134
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):