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Difference between revisions of "TSS:Hg 232485.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|MLR2=
 
|MLR2=
|all_trans=AL834235:-9 LF345644:24 MA581221:24 NM_001002261:-76 LF345643:-158 MA581220:-158 LF345645:259 MA581222:259 LF345642:-295 MA581219:-295 LF345646:338 MA581223:338 LF345641:-473 MA581218:-473
+
|all_trans=HGNC:26559
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.14
 
|cpg_percent=0.14
Line 23: Line 23:
 
|nearest_refseq=NM_015652
 
|nearest_refseq=NM_015652
 
|nearest_unigene=Hs.427927
 
|nearest_unigene=Hs.427927
|num_trans=14
+
|num_trans=118813
 
|species=human
 
|species=human
 
|start=97738552
 
|start=97738552

Latest revision as of 11:11, 21 July 2021

Basic information about the TSS


TSS ID:hg_232485.1
Species:human
Chr:chr10
TSS Classification:no
Start:97738552
End:97738553
Strand:+
TSS Score:1
Start of the center position in the TSS region:97738552
End of the center position in the TSS region:97738553



Gene and protein annotation


Transcript_name:AL834235
Distance:-9
GeneID:118813
HGNC/MGI_ID:HGNC:26559
UniProt_ID:
Gene_name:zinc finger FYVE-type containing 27
Gene_symbol:ZFYVE27
Gene_synonyms:FLJ32919 SPG33
Gene_source:HGNC:26559



Transcript annotation


Transcript_name:AL834235
Distance:-9
Num_trans:118813
All_trans:HGNC:26559



TATA-Box annotation


Distance to TSS:16
Nearest PromoterID:NM_001346516
Entrez ID:84458
Nearest Unigene:Hs.427927
Nearest Refseq:NM_015652
Nearest Ensembl:ENSG00000196233
Gene Name:zinc finger FYVE-type containing 27
Gene Alias:C10orf12|MLR2
Gene Description:ligand dependent nuclear receptor corepressor
Gene Type:protein-coding
CpG%:0.14
GC%:0.726368
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):