Difference between revisions of "TSS:Hg 232058.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000238961.8:-114 NM_001136123:-114 NM_001243770:-114 NM_018121:-114 uc001krt.5:-114 AF460992:-114 AF460991:-114 AK292565:269 ENST00000370271.7:280...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FAM178A= | ||
|all_trans=ENST00000238961.8:-114 NM_001136123:-114 NM_001243770:-114 NM_018121:-114 uc001krt.5:-114 AF460992:-114 AF460991:-114 AK292565:269 ENST00000370271.7:280 uc001krr.2:280 AL833126:280 AL832343:280 BC015131:286 BC047715:290 ENST00000370269.3:296 uc001krs.4:296 BC030565:296 BC064526:296 BC020915:304 ENST00000609386.1:313 uc001krq.5:313 BC073832:313 AL832383:318 AB385255:427 BC160007:427 | |all_trans=ENST00000238961.8:-114 NM_001136123:-114 NM_001243770:-114 NM_018121:-114 uc001krt.5:-114 AF460992:-114 AF460991:-114 AK292565:269 ENST00000370271.7:280 uc001krr.2:280 AL833126:280 AL832343:280 BC015131:286 BC047715:290 ENST00000370269.3:296 uc001krs.4:296 BC030565:296 BC064526:296 BC020915:304 ENST00000609386.1:313 uc001krq.5:313 BC073832:313 AL832383:318 AB385255:427 BC160007:427 | ||
|chr=chr10 | |chr=chr10 | ||
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|distance_to_tss=114 | |distance_to_tss=114 | ||
|end=100912683 | |end=100912683 | ||
| + | |end_of_center_position=100912683 | ||
|entrez_id=55719 | |entrez_id=55719 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=C10orf6 | + | |gene_alias=C10orf6 |
|gene_description=SMC5-SMC6 complex localization factor 2 | |gene_description=SMC5-SMC6 complex localization factor 2 | ||
|gene_id=55719 | |gene_id=55719 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=100912682 | |start=100912682 | ||
| + | |start_of_center_position=100912682 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000238961.8 NM_001136123 NM_001243770 NM_018121 uc001krt.5 AF460992 AF460991 | |transcript_name=ENST00000238961.8 NM_001136123 NM_001243770 NM_018121 uc001krt.5 AF460992 AF460991 | ||
Revision as of 07:52, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 100912682 |
|---|---|
| End of the center position in the TSS region: | 100912683 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000238961.8 NM_001136123 NM_001243770 NM_018121 uc001krt.5 AF460992 AF460991 |
|---|---|
| Distance: | -114 |
| Num_trans: | 25 |
| All_trans: | ENST00000238961.8:-114 NM_001136123:-114 NM_001243770:-114 NM_018121:-114 uc001krt.5:-114 AF460992:-114 AF460991:-114 AK292565:269 ENST00000370271.7:280 uc001krr.2:280 AL833126:280 AL832343:280 BC015131:286 BC047715:290 ENST00000370269.3:296 uc001krs.4:296 BC030565:296 BC064526:296 BC020915:304 ENST00000609386.1:313 uc001krq.5:313 BC073832:313 AL832383:318 AB385255:427 BC160007:427 |
TATA-Box annotation
| Distance to TSS: | 114 |
|---|---|
| Nearest PromoterID: | NM_001243770 |
| Entrez ID: | 55719 |
| Nearest Unigene: | Hs.447458 |
| Nearest Refseq: | NM_018121 |
| Nearest Ensembl: | ENSG00000119906 |
| Gene Name: | SMC5-SMC6 complex localization factor 2 |
| Gene Alias: | C10orf6 |
| Gene Description: | SMC5-SMC6 complex localization factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
