Difference between revisions of "TSS:Hg 232136.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000421206.1:11 uc057wie.1:11 AK298261:-97 |chr=chr10 |cpg_percent=0.015 |distance=11 |distance_to_tss=835 |end=119208520 |entrez_id=2869 |gc_perce...") |
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|distance_to_tss=835 | |distance_to_tss=835 | ||
|end=119208520 | |end=119208520 | ||
| + | |end_of_center_position=119593490 | ||
|entrez_id=2869 | |entrez_id=2869 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
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|species=human | |species=human | ||
|start=119208519 | |start=119208519 | ||
| + | |start_of_center_position=119593489 | ||
|strand=+ | |strand=+ | ||
|tata_box="-34(GCCTTTTAAAGG,-,0.00),-33(CCTTTTAAAGGC,+,0.00),-32(CTTTTAAAGGCA,+,0.00)" | |tata_box="-34(GCCTTTTAAAGG,-,0.00),-33(CCTTTTAAAGGC,+,0.00),-32(CTTTTAAAGGCA,+,0.00)" | ||
Revision as of 09:41, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 119593489 |
|---|---|
| End of the center position in the TSS region: | 119593490 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000421206.1 uc057wie.1 |
|---|---|
| Distance: | 11 |
| Num_trans: | 3 |
| All_trans: | ENST00000421206.1:11 uc057wie.1:11 AK298261:-97 |
TATA-Box annotation
| Distance to TSS: | 835 |
|---|---|
| Nearest PromoterID: | NM_005308 |
| Entrez ID: | 2869 |
| Nearest Unigene: | Hs.524625 |
| Nearest Refseq: | NM_005308 |
| Nearest Ensembl: | ENSG00000198873 |
| Gene Name: | GRK5 intronic transcript 1 |
| Gene Alias: | GPRK5 |
| Gene Description: | G protein-coupled receptor kinase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(GCCTTTTAAAGG,-,0.00),-33(CCTTTTAAAGGC,+,0.00),-32(CTTTTAAAGGCA,+,0.00)" |
