Difference between revisions of "TSS:Hg 232190.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_130784:48 AY027807:48 ENST00000432597.3:-415 uc057xal.1:-415 BC136964:-415 |chr=chr10 |cpg_percent=0.14 |distance=48 |distance_to_tss=538 |end=133569...") |
|||
| Line 6: | Line 6: | ||
|distance_to_tss=538 | |distance_to_tss=538 | ||
|end=133569420 | |end=133569420 | ||
| + | |end_of_center_position=13502934 | ||
|entrez_id=399833 | |entrez_id=399833 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=133569419 | |start=133569419 | ||
| + | |start_of_center_position=13502933 | ||
|strand=- | |strand=- | ||
|transcript_name=NM_130784 AY027807 | |transcript_name=NM_130784 AY027807 | ||
Revision as of 23:56, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 13502933 |
|---|---|
| End of the center position in the TSS region: | 13502934 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_130784 AY027807 |
|---|---|
| Distance: | 48 |
| Num_trans: | 5 |
| All_trans: | NM_130784:48 AY027807:48 ENST00000432597.3:-415 uc057xal.1:-415 BC136964:-415 |
TATA-Box annotation
| Distance to TSS: | 538 |
|---|---|
| Nearest PromoterID: | NR_033789 |
| Entrez ID: | 399833 |
| Nearest Unigene: | Hs.660426 |
| Nearest Refseq: | NM_001001678 |
| Nearest Ensembl: | |
| Gene Name: | synaptonemal complex central element protein 1 |
| Gene Alias: | - |
| Gene Description: | shadow of prion protein homolog (zebrafish) pseudogene 1 |
| Gene Type: | pseudo |
| CpG%: | 0.14 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
