Difference between revisions of "TSS:Hg 232403.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ATP5CL1= | ||
|all_trans=BC000470:0 BC013394:0 BC013865:2 ENST00000460820.6:-5 uc057rpf.1:-5 ENST00000465936.5:-10 uc057rpe.1:-10 AK294061:-10 BC010380:-10 BC016812:-11 AK129907:-11 ENST00000335698.4:-12 uc001ijv.4:-12 AK292896:-12 AK296803:-12 D16562:-12 D16563:-12 ENST00000460362.5:-14 uc057rpd.1:-14 CU677727:18 HQ448142:18 KJ890734:18 KJ896474:18 CR457403:19 ENST00000472202.1:21 uc057rpg.1:21 BC020824:-21 ENST00000462760.1:-30 uc057rpc.1:-30 BC000931:-33 BC026049:40 ENST00000493053.5:-42 uc057rpb.1:-42 NM_005174:-59 NM_001001973:-59 ENST00000356708.11:-60 uc001iju.4:-60 | |all_trans=BC000470:0 BC013394:0 BC013865:2 ENST00000460820.6:-5 uc057rpf.1:-5 ENST00000465936.5:-10 uc057rpe.1:-10 AK294061:-10 BC010380:-10 BC016812:-11 AK129907:-11 ENST00000335698.4:-12 uc001ijv.4:-12 AK292896:-12 AK296803:-12 D16562:-12 D16563:-12 ENST00000460362.5:-14 uc057rpd.1:-14 CU677727:18 HQ448142:18 KJ890734:18 KJ896474:18 CR457403:19 ENST00000472202.1:21 uc057rpg.1:21 BC020824:-21 ENST00000462760.1:-30 uc057rpc.1:-30 BC000931:-33 BC026049:40 ENST00000493053.5:-42 uc057rpb.1:-42 NM_005174:-59 NM_001001973:-59 ENST00000356708.11:-60 uc001iju.4:-60 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=85 | |distance_to_tss=85 | ||
|end=7788189 | |end=7788189 | ||
| + | |end_of_center_position=78037233 | ||
|entrez_id=509 | |entrez_id=509 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=ATP5C | + | |gene_alias=ATP5C |
|gene_description="ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1" | |gene_description="ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1" | ||
|gene_id=509 | |gene_id=509 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=7788188 | |start=7788188 | ||
| + | |start_of_center_position=78037232 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC000470 BC013394 | |transcript_name=BC000470 BC013394 | ||
Revision as of 05:30, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 78037232 |
|---|---|
| End of the center position in the TSS region: | 78037233 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC000470 BC013394 |
|---|---|
| Distance: | 0 |
| Num_trans: | 37 |
| All_trans: | BC000470:0 BC013394:0 BC013865:2 ENST00000460820.6:-5 uc057rpf.1:-5 ENST00000465936.5:-10 uc057rpe.1:-10 AK294061:-10 BC010380:-10 BC016812:-11 AK129907:-11 ENST00000335698.4:-12 uc001ijv.4:-12 AK292896:-12 AK296803:-12 D16562:-12 D16563:-12 ENST00000460362.5:-14 uc057rpd.1:-14 CU677727:18 HQ448142:18 KJ890734:18 KJ896474:18 CR457403:19 ENST00000472202.1:21 uc057rpg.1:21 BC020824:-21 ENST00000462760.1:-30 uc057rpc.1:-30 BC000931:-33 BC026049:40 ENST00000493053.5:-42 uc057rpb.1:-42 NM_005174:-59 NM_001001973:-59 ENST00000356708.11:-60 uc001iju.4:-60 |
TATA-Box annotation
| Distance to TSS: | 85 |
|---|---|
| Nearest PromoterID: | NM_001320886 |
| Entrez ID: | 509 |
| Nearest Unigene: | Hs.271135 |
| Nearest Refseq: | NM_005174 |
| Nearest Ensembl: | ENSG00000165629 |
| Gene Name: | "ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1" |
| Gene Alias: | ATP5C |
| Gene Description: | "ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
