Difference between revisions of "TSS:Hg 232486.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AB058698:-23 ENST00000371097.8:-85 uc057vde.1:-85 AL834245:-85 ENST00000356016.7:-110 NM_032440:-110 uc001kmu.3:-110 |chr=chr10 |cpg_percent=0.095 |dist...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MLR2= | ||
|all_trans=AB058698:-23 ENST00000371097.8:-85 uc057vde.1:-85 AL834245:-85 ENST00000356016.7:-110 NM_032440:-110 uc001kmu.3:-110 | |all_trans=AB058698:-23 ENST00000371097.8:-85 uc057vde.1:-85 AL834245:-85 ENST00000356016.7:-110 NM_032440:-110 uc001kmu.3:-110 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=110 | |distance_to_tss=110 | ||
|end=96833065 | |end=96833065 | ||
| + | |end_of_center_position=97850087 | ||
|entrez_id=84458 | |entrez_id=84458 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=C10orf12 | + | |gene_alias=C10orf12 |
|gene_description=ligand dependent nuclear receptor corepressor | |gene_description=ligand dependent nuclear receptor corepressor | ||
|gene_id=84458 | |gene_id=84458 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=96833064 | |start=96833064 | ||
| + | |start_of_center_position=97850086 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AB058698 | |transcript_name=AB058698 | ||
Revision as of 07:32, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 97850086 |
|---|---|
| End of the center position in the TSS region: | 97850087 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB058698 |
|---|---|
| Distance: | -23 |
| Num_trans: | 7 |
| All_trans: | AB058698:-23 ENST00000371097.8:-85 uc057vde.1:-85 AL834245:-85 ENST00000356016.7:-110 NM_032440:-110 uc001kmu.3:-110 |
TATA-Box annotation
| Distance to TSS: | 110 |
|---|---|
| Nearest PromoterID: | NM_032440 |
| Entrez ID: | 84458 |
| Nearest Unigene: | Hs.427927 |
| Nearest Refseq: | NM_015652 |
| Nearest Ensembl: | ENSG00000196233 |
| Gene Name: | ligand dependent nuclear receptor corepressor |
| Gene Alias: | C10orf12 |
| Gene Description: | ligand dependent nuclear receptor corepressor |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
