Difference between revisions of "TSS:Hg 233731.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001105518:130 ENST00000367501.7:150 uc001grg.5:150 AK127980:192 ENST00000367500.8:229 NM_017673:229 uc001grh.5:229 BC030781:229 AK315802:263 AK291443...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MST070= | ||
| + | |MSTP070= | ||
| + | |TRM1L= | ||
|all_trans=NM_001105518:130 ENST00000367501.7:150 uc001grg.5:150 AK127980:192 ENST00000367500.8:229 NM_017673:229 uc001grh.5:229 BC030781:229 AK315802:263 AK291443:363 | |all_trans=NM_001105518:130 ENST00000367501.7:150 uc001grg.5:150 AK127980:192 ENST00000367500.8:229 NM_017673:229 uc001grh.5:229 BC030781:229 AK315802:263 AK291443:363 | ||
| + | |bG120K12.3= | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=62 | |distance_to_tss=62 | ||
|end=185156930 | |end=185156930 | ||
| + | |end_of_center_position=89589613 | ||
|entrez_id=81627 | |entrez_id=81627 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=C1orf25 | + | |gene_alias=C1orf25 |
|gene_description=tRNA methyltransferase 1 like | |gene_description=tRNA methyltransferase 1 like | ||
|gene_id=54823 | |gene_id=54823 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=185156914 | |start=185156914 | ||
| + | |start_of_center_position=89589612 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_001105518 | |transcript_name=NM_001105518 | ||
Revision as of 21:53, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89589612 |
|---|---|
| End of the center position in the TSS region: | 89589613 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001105518 |
|---|---|
| Distance: | 130 |
| Num_trans: | 10 |
| All_trans: | NM_001105518:130 ENST00000367501.7:150 uc001grg.5:150 AK127980:192 ENST00000367500.8:229 NM_017673:229 uc001grh.5:229 BC030781:229 AK315802:263 AK291443:363 |
TATA-Box annotation
| Distance to TSS: | 62 |
|---|---|
| Nearest PromoterID: | NM_030934 |
| Entrez ID: | 81627 |
| Nearest Unigene: | Hs.107149 |
| Nearest Refseq: | NM_030934 |
| Nearest Ensembl: | ENSG00000121486 |
| Gene Name: | "SWT1, RNA endoribonuclease homolog" |
| Gene Alias: | C1orf25 |
| Gene Description: | tRNA methyltransferase 1 like |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
