Difference between revisions of "TSS:Hg 23452.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000409273.5:-63 ENST00000409605.1:-63 NM_001199145:-63 NM_001199144:-63 uc010fpq.4:-63 uc010fpr.4:-63 EF119711:-63 EF119717:-63 |chr=chr2 |cpg_per...") |
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|distance_to_tss=68 | |distance_to_tss=68 | ||
|end=167187356 | |end=167187356 | ||
| + | |end_of_center_position=167187351 | ||
|entrez_id=129446 | |entrez_id=129446 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=167187345 | |start=167187345 | ||
| + | |start_of_center_position=167187350 | ||
|strand=+ | |strand=+ | ||
|tata_box="-29(TCCTTTAGACGC,+,0.00)" | |tata_box="-29(TCCTTTAGACGC,+,0.00)" | ||
Revision as of 21:13, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 167187350 |
|---|---|
| End of the center position in the TSS region: | 167187351 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000409273.5 ENST00000409605.1 NM_001199145 NM_001199144 uc010fpq.4 uc010fpr.4 EF119711 EF119717 |
|---|---|
| Distance: | -63 |
| Num_trans: | 8 |
| All_trans: | ENST00000409273.5:-63 ENST00000409605.1:-63 NM_001199145:-63 NM_001199144:-63 uc010fpq.4:-63 uc010fpr.4:-63 EF119711:-63 EF119717:-63 |
TATA-Box annotation
| Distance to TSS: | 68 |
|---|---|
| Nearest PromoterID: | NM_001199145 |
| Entrez ID: | 129446 |
| Nearest Unigene: | Hs.73680 |
| Nearest Refseq: | NM_152381 |
| Nearest Ensembl: | ENSG00000163092 |
| Gene Name: | xin actin binding repeat containing 2 |
| Gene Alias: | CMYA3 |
| Gene Description: | xin actin binding repeat containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-29(TCCTTTAGACGC,+,0.00)" |
