Difference between revisions of "TSS:Hg 23453.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000409273.5:-82 ENST00000409605.1:-82 NM_001199145:-82 NM_001199144:-82 uc010fpq.4:-82 uc010fpr.4:-82 EF119711:-82 EF119717:-82 |chr=chr2 |cpg_per...") |
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|distance_to_tss=90 | |distance_to_tss=90 | ||
|end=167187381 | |end=167187381 | ||
| + | |end_of_center_position=167187373 | ||
|entrez_id=129446 | |entrez_id=129446 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
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|species=human | |species=human | ||
|start=167187364 | |start=167187364 | ||
| + | |start_of_center_position=167187372 | ||
|strand=+ | |strand=+ | ||
|tata_box="-51(TCCTTTAGACGC,+,0.00)" | |tata_box="-51(TCCTTTAGACGC,+,0.00)" | ||
Revision as of 21:13, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 167187372 |
|---|---|
| End of the center position in the TSS region: | 167187373 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000409273.5 ENST00000409605.1 NM_001199145 NM_001199144 uc010fpq.4 uc010fpr.4 EF119711 EF119717 |
|---|---|
| Distance: | -82 |
| Num_trans: | 8 |
| All_trans: | ENST00000409273.5:-82 ENST00000409605.1:-82 NM_001199145:-82 NM_001199144:-82 uc010fpq.4:-82 uc010fpr.4:-82 EF119711:-82 EF119717:-82 |
TATA-Box annotation
| Distance to TSS: | 90 |
|---|---|
| Nearest PromoterID: | NM_001199145 |
| Entrez ID: | 129446 |
| Nearest Unigene: | Hs.73680 |
| Nearest Refseq: | NM_152381 |
| Nearest Ensembl: | ENSG00000163092 |
| Gene Name: | xin actin binding repeat containing 2 |
| Gene Alias: | CMYA3 |
| Gene Description: | xin actin binding repeat containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-51(TCCTTTAGACGC,+,0.00)" |
