Difference between revisions of "TSS:Hg 23475.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000295237.10:29 uc061pfw.1:29 AL832452:29 AK092683:-116 AL832336:124 AL832011:165 CR627255:-220 AK096907:416 BX647645:430 AL831970:449 BX647845:49...") |
|||
| Line 6: | Line 6: | ||
|distance_to_tss=61363 | |distance_to_tss=61363 | ||
|end=167248653 | |end=167248653 | ||
| + | |end_of_center_position=167248646 | ||
|entrez_id=129446 | |entrez_id=129446 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=167248638 | |start=167248638 | ||
| + | |start_of_center_position=167248645 | ||
|strand=+ | |strand=+ | ||
|tata_box="39(GCATATAAAAGA,-,0.00)" | |tata_box="39(GCATATAAAAGA,-,0.00)" | ||
Revision as of 21:15, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 167248645 |
|---|---|
| End of the center position in the TSS region: | 167248646 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000295237.10 uc061pfw.1 AL832452 |
|---|---|
| Distance: | 29 |
| Num_trans: | 11 |
| All_trans: | ENST00000295237.10:29 uc061pfw.1:29 AL832452:29 AK092683:-116 AL832336:124 AL832011:165 CR627255:-220 AK096907:416 BX647645:430 AL831970:449 BX647845:492 |
TATA-Box annotation
| Distance to TSS: | 61363 |
|---|---|
| Nearest PromoterID: | NM_001199145 |
| Entrez ID: | 129446 |
| Nearest Unigene: | Hs.73680 |
| Nearest Refseq: | NM_152381 |
| Nearest Ensembl: | ENSG00000163092 |
| Gene Name: | xin actin binding repeat containing 2 |
| Gene Alias: | CMYA3 |
| Gene Description: | xin actin binding repeat containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "39(GCATATAAAAGA,-,0.00)" |
