Difference between revisions of "TSS:Hg 240853.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000296577.8:18 uc003ijy.4:18 NM_002940:90 NM_001040876:90 ENST00000502586.5:374 uc062zyr.1:374 ENST00000502803.5:397 ENST00000507193.5:397 uc062zy...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |OABP= | ||
| + | |RLI= | ||
| + | |RLI1= | ||
| + | |RNASEL1= | ||
| + | |RNASELI= | ||
| + | |RNS4I= | ||
|all_trans=ENST00000296577.8:18 uc003ijy.4:18 NM_002940:90 NM_001040876:90 ENST00000502586.5:374 uc062zyr.1:374 ENST00000502803.5:397 ENST00000507193.5:397 uc062zys.1:397 uc062zyt.1:397 AK315198:397 ENST00000506506.5:400 uc062zyu.1:400 AB062293:416 X76388:425 BC016283:428 | |all_trans=ENST00000296577.8:18 uc003ijy.4:18 NM_002940:90 NM_001040876:90 ENST00000502586.5:374 uc062zyr.1:374 ENST00000502803.5:397 ENST00000507193.5:397 uc062zys.1:397 uc062zyt.1:397 AK315198:397 ENST00000506506.5:400 uc062zyu.1:400 AB062293:416 X76388:425 BC016283:428 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=-90 | |distance_to_tss=-90 | ||
|end=145097914 | |end=145097914 | ||
| + | |end_of_center_position=76213801 | ||
|entrez_id=6059 | |entrez_id=6059 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=ABC38 | + | |gene_alias=ABC38 |
|gene_description=ATP binding cassette subfamily E member 1 | |gene_description=ATP binding cassette subfamily E member 1 | ||
|gene_id=6059 | |gene_id=6059 | ||
| Line 24: | Line 31: | ||
|species=human | |species=human | ||
|start=145097913 | |start=145097913 | ||
| + | |start_of_center_position=76213800 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000296577.8 uc003ijy.4 | |transcript_name=ENST00000296577.8 uc003ijy.4 | ||
Revision as of 18:52, 13 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 76213800 |
|---|---|
| End of the center position in the TSS region: | 76213801 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000296577.8 uc003ijy.4 |
|---|---|
| Distance: | 18 |
| Num_trans: | 16 |
| All_trans: | ENST00000296577.8:18 uc003ijy.4:18 NM_002940:90 NM_001040876:90 ENST00000502586.5:374 uc062zyr.1:374 ENST00000502803.5:397 ENST00000507193.5:397 uc062zys.1:397 uc062zyt.1:397 AK315198:397 ENST00000506506.5:400 uc062zyu.1:400 AB062293:416 X76388:425 BC016283:428 |
TATA-Box annotation
| Distance to TSS: | -90 |
|---|---|
| Nearest PromoterID: | NM_001040876 |
| Entrez ID: | 6059 |
| Nearest Unigene: | Hs.12013 |
| Nearest Refseq: | NM_002940 |
| Nearest Ensembl: | ENSG00000164163 |
| Gene Name: | ATP binding cassette subfamily E member 1 |
| Gene Alias: | ABC38 |
| Gene Description: | ATP binding cassette subfamily E member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
