Difference between revisions of "TSS:Hg 101429.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=85 |entrez_id=4958 |gc_percent=0.333333 |gene_alias=OSAD|SLRR2C |gene_description=osteomodulin |gene_name=OMD |gene_type=protei...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SLRR2C= | ||
| + | |all_trans=ENST00000375550.4:0 uc004asd.5:0 BC046356:3 AY358872:6 AK225922:59 AK313055:66 NM_005014:-73 AB000114:180 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=0 | ||
|distance_to_tss=85 | |distance_to_tss=85 | ||
| + | |end=92424481 | ||
|entrez_id=4958 | |entrez_id=4958 | ||
|gc_percent=0.333333 | |gc_percent=0.333333 | ||
|gene_alias=OSAD|SLRR2C | |gene_alias=OSAD|SLRR2C | ||
|gene_description=osteomodulin | |gene_description=osteomodulin | ||
| − | |gene_name=OMD | + | |gene_id=4958 |
| + | |gene_name=osteomodulin | ||
| + | |gene_source=HGNC:8134 | ||
| + | |gene_symbol=OMD | ||
| + | |gene_synonyms=SLRR2C osteoadherin | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:8134 | ||
|nearest_ensembl=ENSG00000127083 | |nearest_ensembl=ENSG00000127083 | ||
|nearest_promoter_id=NM_005014 | |nearest_promoter_id=NM_005014 | ||
|nearest_refseq=NM_005014 | |nearest_refseq=NM_005014 | ||
|nearest_unigene=Hs.94070 | |nearest_unigene=Hs.94070 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=92424457 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375550.4 uc004asd.5 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101429.1 | |tss_id=hg_101429.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q99983 | ||
}} | }} | ||
Revision as of 18:43, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375550.4 uc004asd.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000375550.4:0 uc004asd.5:0 BC046356:3 AY358872:6 AK225922:59 AK313055:66 NM_005014:-73 AB000114:180 |
TATA-Box annotation
| Distance to TSS: | 85 |
|---|---|
| Nearest PromoterID: | NM_005014 |
| Entrez ID: | 4958 |
| Nearest Unigene: | Hs.94070 |
| Nearest Refseq: | NM_005014 |
| Nearest Ensembl: | ENSG00000127083 |
| Gene Name: | osteomodulin |
| Gene Alias: | OSAD |
| Gene Description: | osteomodulin |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.333333 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
