Difference between revisions of "TSS:Hg 46501.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000496514.5:0 uc003gap.4:0 S41458:0 EU176360:4 DQ895767:4 X66142:4 CU674100:8 KJ897313:8 KR709770:8 KR709771:8 BT009794:9 ENST00000255622.10:-14 u...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CSNBAD2= | ||
| + | |PDEB= | ||
| + | |RP40= | ||
|all_trans=ENST00000496514.5:0 uc003gap.4:0 S41458:0 EU176360:4 DQ895767:4 X66142:4 CU674100:8 KJ897313:8 KR709770:8 KR709771:8 BT009794:9 ENST00000255622.10:-14 uc003gao.5:-14 BC000249:-14 NM_000283:-24 NM_001145291:-24 | |all_trans=ENST00000496514.5:0 uc003gap.4:0 S41458:0 EU176360:4 DQ895767:4 X66142:4 CU674100:8 KJ897313:8 KR709770:8 KR709771:8 BT009794:9 ENST00000255622.10:-14 uc003gao.5:-14 BC000249:-14 NM_000283:-24 NM_001145291:-24 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=34 | |distance_to_tss=34 | ||
|end=625618 | |end=625618 | ||
| + | |end_of_center_position=625608 | ||
|entrez_id=5158 | |entrez_id=5158 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=CSNB3 | + | |gene_alias=CSNB3 |
|gene_description=phosphodiesterase 6B | |gene_description=phosphodiesterase 6B | ||
|gene_id=5158 | |gene_id=5158 | ||
| Line 22: | Line 26: | ||
|nearest_unigene=Hs.623810 | |nearest_unigene=Hs.623810 | ||
|num_trans=16 | |num_trans=16 | ||
| + | |rd1= | ||
|species=human | |species=human | ||
|start=625597 | |start=625597 | ||
| + | |start_of_center_position=625607 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000496514.5 uc003gap.4 S41458 | |transcript_name=ENST00000496514.5 uc003gap.4 S41458 | ||
Revision as of 14:18, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 625607 |
|---|---|
| End of the center position in the TSS region: | 625608 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000496514.5 uc003gap.4 S41458 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000496514.5:0 uc003gap.4:0 S41458:0 EU176360:4 DQ895767:4 X66142:4 CU674100:8 KJ897313:8 KR709770:8 KR709771:8 BT009794:9 ENST00000255622.10:-14 uc003gao.5:-14 BC000249:-14 NM_000283:-24 NM_001145291:-24 |
TATA-Box annotation
| Distance to TSS: | 34 |
|---|---|
| Nearest PromoterID: | NM_001145291 |
| Entrez ID: | 5158 |
| Nearest Unigene: | Hs.623810 |
| Nearest Refseq: | NM_000283 |
| Nearest Ensembl: | ENSG00000133256 |
| Gene Name: | phosphodiesterase 6B |
| Gene Alias: | CSNB3 |
| Gene Description: | phosphodiesterase 6B |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
