Difference between revisions of "TSS:Hg 49568.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC063856:0 ENST00000394339.2:-18 uc003ifb.5:-18 AK026960:-18 NM_005841:-38 ENST00000508849.1:421 uc062zkx.1:421 |chr=chr4 |cpg_percent=0.04 |distance=0...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=47 | |distance_to_tss=47 | ||
|end=123399547 | |end=123399547 | ||
| + | |end_of_center_position=123399538 | ||
|entrez_id=10252 | |entrez_id=10252 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=123399527 | |start=123399527 | ||
| + | |start_of_center_position=123399537 | ||
|strand=+ | |strand=+ | ||
|tata_box="80(TTCCTTTAAAGC,-,0.00),81(TCCTTTAAAGCA,+,0.00)" | |tata_box="80(TTCCTTTAAAGC,-,0.00),81(TCCTTTAAAGCA,+,0.00)" | ||
Revision as of 22:02, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 123399537 |
|---|---|
| End of the center position in the TSS region: | 123399538 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC063856 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | BC063856:0 ENST00000394339.2:-18 uc003ifb.5:-18 AK026960:-18 NM_005841:-38 ENST00000508849.1:421 uc062zkx.1:421 |
TATA-Box annotation
| Distance to TSS: | 47 |
|---|---|
| Nearest PromoterID: | NM_005841 |
| Entrez ID: | 10252 |
| Nearest Unigene: | Hs.744854 |
| Nearest Refseq: | NM_005841 |
| Nearest Ensembl: | ENSG00000164056 |
| Gene Name: | sprouty RTK signaling antagonist 1 |
| Gene Alias: | hSPRY1 |
| Gene Description: | sprouty RTK signaling antagonist 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "80(TTCCTTTAAAGC,-,0.00),81(TCCTTTAAAGCA,+,0.00)" |
