Difference between revisions of "TSS:Hg 52012.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000506961.5:59 uc062wit.1:59 ENST00000514090.5:60 uc062wik.1:60 ENST00000356504.5:62 NM_001114175:62 uc003gxc.5:62 AK125179:62 ENST00000503806.5:7...") |
|||
| Line 6: | Line 6: | ||
|distance_to_tss=-65 | |distance_to_tss=-65 | ||
|end=46389447 | |end=46389447 | ||
| + | |end_of_center_position=46389444 | ||
|entrez_id=2555 | |entrez_id=2555 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=46389440 | |start=46389440 | ||
| + | |start_of_center_position=46389443 | ||
|strand=- | |strand=- | ||
|tata_box="-52(TCTTTTATAGTC,+,0.00)" | |tata_box="-52(TCTTTTATAGTC,+,0.00)" | ||
Revision as of 16:58, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 46389443 |
|---|---|
| End of the center position in the TSS region: | 46389444 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000506961.5 uc062wit.1 |
|---|---|
| Distance: | 59 |
| Num_trans: | 23 |
| All_trans: | ENST00000506961.5:59 uc062wit.1:59 ENST00000514090.5:60 uc062wik.1:60 ENST00000356504.5:62 NM_001114175:62 uc003gxc.5:62 AK125179:62 ENST00000503806.5:78 uc062wis.1:78 ENST00000507460.1:-103 uc010igd.2:-103 AK307128:-103 AB209295:-308 ENST00000630416.2:-341 ENST00000514193.5:-341 uc062wil.1:-341 uc062wir.1:-341 AK293466:-341 AK289662:404 ENST00000381620.8:-481 uc010igc.4:-481 S62907:-481 |
TATA-Box annotation
| Distance to TSS: | -65 |
|---|---|
| Nearest PromoterID: | NM_001114175 |
| Entrez ID: | 2555 |
| Nearest Unigene: | Hs.48372 |
| Nearest Refseq: | NM_000807 |
| Nearest Ensembl: | ENSG00000151834 |
| Gene Name: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Alias: | - |
| Gene Description: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-52(TCTTTTATAGTC,+,0.00)" |
