Difference between revisions of "TSS:Hg 52014.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000507460.1:3 uc010igd.2:3 AK307128:3 ENST00000506961.5:171 uc062wit.1:171 ENST00000514090.5:172 uc062wik.1:172 ENST00000356504.5:174 NM_001114175...") |
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|distance_to_tss=-8 | |distance_to_tss=-8 | ||
|end=46389563 | |end=46389563 | ||
| + | |end_of_center_position=46389558 | ||
|entrez_id=2555 | |entrez_id=2555 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=46389552 | |start=46389552 | ||
| + | |start_of_center_position=46389557 | ||
|strand=- | |strand=- | ||
|tata_box="62(TCTTTTATAGTC,+,0.00)" | |tata_box="62(TCTTTTATAGTC,+,0.00)" | ||
Revision as of 16:58, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 46389557 |
|---|---|
| End of the center position in the TSS region: | 46389558 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000507460.1 uc010igd.2 AK307128 |
|---|---|
| Distance: | 3 |
| Num_trans: | 26 |
| All_trans: | ENST00000507460.1:3 uc010igd.2:3 AK307128:3 ENST00000506961.5:171 uc062wit.1:171 ENST00000514090.5:172 uc062wik.1:172 ENST00000356504.5:174 NM_001114175:174 uc003gxc.5:174 AK125179:174 ENST00000503806.5:190 uc062wis.1:190 AB209295:-192 ENST00000630416.2:-225 ENST00000514193.5:-225 uc062wil.1:-225 uc062wir.1:-225 AK293466:-225 ENST00000381620.8:-365 uc010igc.4:-365 S62907:-365 ENST00000540012.5:-476 NM_000807:-476 NM_001286827:-476 uc062wim.1:-476 |
TATA-Box annotation
| Distance to TSS: | -8 |
|---|---|
| Nearest PromoterID: | NM_001330690 |
| Entrez ID: | 2555 |
| Nearest Unigene: | Hs.48372 |
| Nearest Refseq: | NM_000807 |
| Nearest Ensembl: | ENSG00000151834 |
| Gene Name: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Alias: | - |
| Gene Description: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "62(TCTTTTATAGTC,+,0.00)" |
